RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 PYHIN1Q6K0P9 492 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 TEX38Q6PEX7 206 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 IDO2Q6ZQW0 420 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 RNF152Q8N8N0 203 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 BVESQ8NE79 360 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 SECTM1Q8WVN6 248 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 RITA1Q96K30 269 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 NOL4LQ96MY1 436 aaPredicted RBP9.34□□□□□ -0.91
VPS52-213ENST00000461743 CITED2Q99967 270 aaPredicted RBP9.34□□□□□ -0.91
VPS52-213ENST00000461743 SLC5A7Q9GZV3 580 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 FBXL15Q9H469 300 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 METTL1Q9UBP6 276 aaKnown RBP9.34□□□□□ -0.91
VPS52-213ENST00000461743 MTFP1Q9UDX5 166 aa9.34□□□□□ -0.91
VPS52-213ENST00000461743 TCRBV4S1A1TA0A5B7 111 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 ADARB2-AS1A8MUL3 147 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 ATP6V0E1O15342 81 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 RBFOX2O43251 390 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS52-213ENST00000461743 TSPAN15O95858 294 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 IGLV2-23P01705 113 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 RFX2P48378 723 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 UBE2KP61086 200 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 VMA21Q3ZAQ7 101 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 ZNF562Q6V9R5 426 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 NRARPQ7Z6K4 114 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 PPP1R27Q86WC6 154 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 ARRDC1Q8N5I2 433 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 C11orf44Q8N8P7 122 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 SMIM4Q8WVI0 70 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 FCAMRQ8WWV6 532 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 DIRAS2Q96HU8 199 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 ZNF2Q9BSG1 426 aaPredicted RBP9.33□□□□□ -0.92
VPS52-213ENST00000461743 PARP11Q9NR21 331 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 ZFP57Q9NU63 452 aa9.33□□□□□ -0.92
VPS52-213ENST00000461743 NOTCH1P46531 2555 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 CTDSP2O14595 271 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 SLC25A17O43808 307 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 IGHG4P01861 327 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 PMP2P02689 132 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 HTR2BP41595 481 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 LINC00205P59089 165 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 TAS2R19P59542 299 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 FXYD4P59646 89 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 RPL23AP62750 156 aaKnown RBP9.32□□□□□ -0.92
VPS52-213ENST00000461743 TCTEX1D4Q5JR98 221 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 CXorf66Q5JRM2 361 aaPredicted RBP9.32□□□□□ -0.92
VPS52-213ENST00000461743 LPCAT3Q6P1A2 487 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 SLC51BQ86UW2 128 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 TMEM17Q86X19 198 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 CMTM1Q8IZ96 169 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 TEX45Q8NA69 505 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 OR52I2Q8NH67 350 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 VSTM2AQ8TAG5 236 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 TCTEX1D2Q8WW35 142 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 ARPC1AQ92747 370 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 ABHD1Q96SE0 405 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 AIFM2Q9BRQ8 373 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 FXYD6Q9H0Q3 95 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 V9GYH0 126 aa9.32□□□□□ -0.92
VPS52-213ENST00000461743 TRAV41A0A0B4J266 112 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 LINC01548A6NM66 108 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 FCGR3BO75015 233 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 CA2P00918 260 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 FCER2P06734 321 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 CRYGBP07316 175 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 PSMB8P28062 276 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 S100GP29377 79 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 TNFSF8P32971 234 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 UCP3P55916 312 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 TSPAN5P62079 268 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 RPL30P62888 115 aaKnown RBP9.31□□□□□ -0.92
VPS52-213ENST00000461743 CX3CL1P78423 397 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 NDPQ00604 133 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 TMEM267Q0VDI3 215 aaPredicted RBP9.31□□□□□ -0.92
VPS52-213ENST00000461743 IL18Q14116 193 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 NSUN5P1Q3KNT7 163 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 C19orf54Q5BKX5 351 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 RNASE10Q5GAN6 216 aaKnown RBP9.31□□□□□ -0.92
VPS52-213ENST00000461743 KHDC1LQ5JSQ8 128 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 ZNF818PQ6ZRF7 136 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 ZNF329Q86UD4 541 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 CD300LFQ8TDQ1 290 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 TMEM68Q96MH6 324 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 SRRQ9GZT4 340 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 CCL28Q9NRJ3 127 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 TAS2R8Q9NYW2 309 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 LINC00527Q9UJ94 153 aa9.31□□□□□ -0.92
VPS52-213ENST00000461743 DNAH3Q8TD57 4116 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 GPR31O00270 319 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 GSTZ1O43708 216 aaPredicted RBP9.3□□□□□ -0.92
VPS52-213ENST00000461743 HRASP01112 189 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 IGLV1-40P01703 118 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 C1QBP02746 253 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 CD74P04233 296 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 IFNA6P05013 189 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 FGF2P09038 288 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 PF4V1P10720 104 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 PTBP1P26599 531 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS52-213ENST00000461743 PPIFP30405 207 aaKnown RBP9.3□□□□□ -0.92
VPS52-213ENST00000461743 GNRHRP30968 328 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms