RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ERVK-16P61578 105 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 DHODHQ02127 395 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 SSX9Q7RTT3 188 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 VKORC1L1Q8N0U8 176 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 C5orf56Q8N8D9 126 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 Q8N9W7 124 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 DUSP18Q8NEJ0 188 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 DMBX1Q8NFW5 382 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 CASTOR1Q8WTX7 329 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 R3HDM4Q96D70 268 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 GALNT14Q96FL9 552 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 TMEM222Q9H0R3 208 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 FBXL15Q9H469 300 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 PRR13Q9NZ81 148 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 METTL1Q9UBP6 276 aaKnown RBP8.11□□□□□ -1.11
UPF2-204ENST00000460569 FAM181BA6NEQ2 426 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 SH2D7A6NKC9 451 aaPredicted RBP8.1□□□□□ -1.11
UPF2-204ENST00000460569 MARCH11A6NNE9 402 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
UPF2-204ENST00000460569 INMT-MINDY4F8WBC2 141 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 M0QZK8 103 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 RRHO14718 337 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 FGF16O43320 207 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 NDUFA3O95167 84 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 SFT2D2O95562 160 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 KRASP01116 189 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 IGKV1-39P01597 117 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 IGLV2-23P01705 113 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 IGKV1D-39P04432 117 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 CRYBA1P05813 215 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 OR4E1P0C645 316 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 NQO2P16083 231 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 G6PCP35575 357 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 AKR1C2P52895 323 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 UBE2KP61086 200 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 SRPXP78539 464 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 DHRS2Q13268 280 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 TMEM187Q14656 261 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 PSG5Q15238 335 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 C5orf64Q2M2E5 130 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 C9orf152Q5JTZ5 239 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 LYG2Q86SG7 212 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 FAM71E2Q8N5Q1 922 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 NPBQ8NG41 125 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 RNASE11Q8TAA1 199 aaKnown RBP8.1□□□□□ -1.11
UPF2-204ENST00000460569 GLYATL2Q8WU03 294 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 RHOVQ96L33 236 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 RASL11BQ9BPW5 248 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 SEC22CQ9BRL7 303 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 AIFM2Q9BRQ8 373 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 NPFFR1Q9GZQ6 430 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 PLSCR3Q9NRY6 295 aa8.1□□□□□ -1.11
UPF2-204ENST00000460569 SETD2Q9BYW2 2564 aaPredicted RBP8.1□□□□□ -1.11
UPF2-204ENST00000460569 JMJD1CQ15652 2540 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 C9orf170A2RU37 121 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 CDS2O95674 445 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 MECP2P51608 486 aaKnown RBP8.09□□□□□ -1.11
UPF2-204ENST00000460569 RPL15P61313 204 aaKnown RBP8.09□□□□□ -1.11
UPF2-204ENST00000460569 POU2AF1Q16633 256 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 ARSJQ5FYB0 599 aaPredicted RBP8.09□□□□□ -1.11
UPF2-204ENST00000460569 TMEM268Q5VZI3 342 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 OR4A47Q6IF82 309 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 ZNF695Q8IW36 515 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 LGI3Q8N145 548 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 OR52B4Q8NGK2 314 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 LHFPL5Q8TAF8 219 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 VSTM2AQ8TAG5 236 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 ZFAND2BQ8WV99 257 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 RBPMSQ93062 196 aaKnown RBP8.09□□□□□ -1.11
UPF2-204ENST00000460569 CLCC1Q96S66 551 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 MARVELD1Q9BSK0 173 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 ALX4Q9H161 411 aaPredicted RBP8.09□□□□□ -1.11
UPF2-204ENST00000460569 TMEM140Q9NV12 185 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 SIGLEC9Q9Y336 463 aa8.09□□□□□ -1.11
UPF2-204ENST00000460569 NIPBLQ6KC79 2804 aaeCLIP8.08□□□□□ -1.12
UPF2-204ENST00000460569 CREBL2O60519 120 aaPredicted RBP8.08□□□□□ -1.12
UPF2-204ENST00000460569 ATG12O94817 140 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 KBTBD11O94819 623 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 OR2A4O95047 310 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 DUS4LO95620 317 aaKnown RBP8.08□□□□□ -1.12
UPF2-204ENST00000460569 DHFRP00374 187 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 AMY1AP04745 511 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 RAG2P55895 527 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 GNB1P62873 340 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 BLCAPP62952 87 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 ANKRD55Q3KP44 614 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 LIN54Q6MZP7 749 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 H2BFWTQ7Z2G1 175 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 PPP1R27Q86WC6 154 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 PRIMA1Q86XR5 153 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 SELENOHQ8IZQ5 122 aaKnown RBP8.08□□□□□ -1.12
UPF2-204ENST00000460569 PUSL1Q8N0Z8 303 aaKnown RBP8.08□□□□□ -1.12
UPF2-204ENST00000460569 SLC35G3Q8N808 338 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 TEX45Q8NA69 505 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 COQ8AQ8NI60 647 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 IL22RA2Q969J5 263 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 RRNAD1Q96FB5 475 aaKnown RBP8.08□□□□□ -1.12
UPF2-204ENST00000460569 SEC22AQ96IW7 307 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 TMEM56Q96MV1 263 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms