RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 A0A1W2PN81 502 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 GABARAPH6UMI1 98 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 RAMP3O60896 148 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 CD3DP04234 171 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 TNFSF8P32971 234 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 CHRNA7P36544 502 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 CDX1P47902 265 aaPredicted RBP12.26□□□□□ -0.45
ACTB-206ENST00000443528 TSPAN5P62079 268 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 GNB1P62873 340 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 TMEM267Q0VDI3 215 aaPredicted RBP12.26□□□□□ -0.45
ACTB-206ENST00000443528 PRSS8Q16651 343 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 AKIRIN2Q53H80 203 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 PYHIN1Q6K0P9 492 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 UNQ5815/PRO19632Q6UWF5 114 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 C8orf86Q6ZUL3 223 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 ZNF695Q8IW36 515 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 VKORC1L1Q8N0U8 176 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 KLHL30-AS1Q8NEE0 82 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 LFNGQ8NES3 379 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 GRPEL2Q8TAA5 225 aa12.26□□□□□ -0.45
ACTB-206ENST00000443528 TINAGL1Q9GZM7 467 aaPredicted RBP12.26□□□□□ -0.45
ACTB-206ENST00000443528 FOXA2Q9Y261 457 aaPredicted RBP12.26□□□□□ -0.45
ACTB-206ENST00000443528 NUDT19A8MXV4 375 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 ZNF701M0R085 212 aaPredicted RBP12.25□□□□□ -0.45
ACTB-206ENST00000443528 PGLYRP1O75594 196 aaPredicted RBP12.25□□□□□ -0.45
ACTB-206ENST00000443528 CNIH1O95406 144 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 KIR2DS2P43631 304 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 IL18Q14116 193 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 ACTBL2Q562R1 376 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 AADACL3Q5VUY0 350 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 SPAG16Q8N0X2 631 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 TCTEX1D1Q8N7M0 179 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 WFDC9Q8NEX5 89 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 OR51H1Q8NH63 302 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 SMIM4Q8WVI0 70 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 BORCS5Q969J3 196 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 SOSTQ9BQB4 213 aa12.25□□□□□ -0.45
ACTB-206ENST00000443528 ZNF430Q9H8G1 570 aaPredicted RBP12.25□□□□□ -0.45
ACTB-206ENST00000443528 CTDSPLO15194 276 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 RBFOX2O43251 390 aaKnown RBP eCLIP12.24□□□□□ -0.453e-25■■■■■ 36.7
ACTB-206ENST00000443528 PF4P02776 101 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 CD74P04233 296 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 SLC6A1P30531 599 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 RAB9AP51151 201 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 MRPS10P82664 201 aaKnown RBP12.24□□□□□ -0.45
ACTB-206ENST00000443528 CATR1Q13166 79 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 RNASE10Q5GAN6 216 aaKnown RBP12.24□□□□□ -0.45
ACTB-206ENST00000443528 ASPHD1Q5U4P2 390 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 TMEM65Q6PI78 240 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 PUSL1Q8N0Z8 303 aaKnown RBP12.24□□□□□ -0.45
ACTB-206ENST00000443528 ZNF491Q8N8L2 437 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 TMEM229BQ8NBD8 167 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 OR4D10Q8NGI6 311 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 CASTOR1Q8WTX7 329 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 RSRP1Q9BUV0 290 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 RABL2AQ9UBK7 228 aaPredicted RBP12.24□□□□□ -0.45
ACTB-206ENST00000443528 RABL2BQ9UNT1 228 aa12.24□□□□□ -0.45
ACTB-206ENST00000443528 G3V4G9 280 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 GPR31O00270 319 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 RLN1P04808 185 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 TBPP20226 339 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 UCP3P55916 312 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 SSBP1Q04837 148 aaKnown RBP12.23□□□□□ -0.45
ACTB-206ENST00000443528 TNXAQ16473 311 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 LHFPL1Q86WI0 220 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 C1QL4Q86Z23 238 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 LINC00482Q8N8I6 264 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 OR5M8Q8NGP6 311 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 RAX2Q96IS3 184 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 RHOVQ96L33 236 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 UBE2E2Q96LR5 201 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 DUX3Q96PT4 197 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 P2RX4Q99571 388 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 GNB4Q9HAV0 340 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 NOTCH1P46531 2555 aa12.23□□□□□ -0.45
ACTB-206ENST00000443528 MSGN1A6NI15 193 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 GSTZ1O43708 216 aaPredicted RBP12.22□□□□□ -0.45
ACTB-206ENST00000443528 KBTBD11O94819 623 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 OR2A4O95047 310 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 HPRT1P00492 218 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 HRASP01112 189 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 IFNA6P05013 189 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 MYCNOSP40205 109 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 TAS2R19P59542 299 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 DEFB136Q30KP8 78 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 PHLDA2Q53GA4 152 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 C10orf55Q5SWW7 151 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 SAMD5Q5TGI4 173 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 STEAP1BQ6NZ63 245 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 LPCAT3Q6P1A2 487 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 SSX9Q7RTT3 188 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 MRPL41Q8IXM3 137 aaKnown RBP12.22□□□□□ -0.45
ACTB-206ENST00000443528 MMD2Q8IY49 270 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 CMTM1Q8IZ96 169 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 ARRDC1Q8N5I2 433 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 VSTM2AQ8TAG5 236 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 TMEM167AQ8TBQ9 72 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 C4orf3Q8WVX3 66 aa12.22□□□□□ -0.45
ACTB-206ENST00000443528 SRSF12Q8WXF0 261 aaKnown RBP12.22□□□□□ -0.45
ACTB-206ENST00000443528 OR2A7Q96R45 310 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms