RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 GON7Q9BXV9 100 aa13.56□□□□□ -0.24
CTSD-203ENST00000429746 GABARAPH6UMI1 98 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 CTDSPLO15194 276 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 RBFOX2O43251 390 aaKnown RBP eCLIP13.55□□□□□ -0.242e-12■■■■□ 22.8
CTSD-203ENST00000429746 CD3DP04234 171 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 TNFSF8P32971 234 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 CDX1P47902 265 aaPredicted RBP13.55□□□□□ -0.24
CTSD-203ENST00000429746 PLGLAQ15195 96 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 PRSS8Q16651 343 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 ECSCRQ19T08 205 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 AKIRIN2Q53H80 203 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 SAMD5Q5TGI4 173 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 C8orf86Q6ZUL3 223 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 LINC00482Q8N8I6 264 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 LFNGQ8NES3 379 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 SMIM4Q8WVI0 70 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 P2RX4Q99571 388 aa13.55□□□□□ -0.24
CTSD-203ENST00000429746 RSL24D1Q9UHA3 163 aaKnown RBP13.55□□□□□ -0.24
CTSD-203ENST00000429746 A0A1B0GW64 132 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 PGLYRP1O75594 196 aaPredicted RBP13.54□□□□□ -0.24
CTSD-203ENST00000429746 ZNF735P0CB33 412 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 FXYD3Q14802 87 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 BEAN1Q3B7T3 259 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 REC114Q7Z4M0 266 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 ZNF491Q8N8L2 437 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 OR6F1Q8NGZ6 308 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 OR4S2Q8NH73 311 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 CASTOR1Q8WTX7 329 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 DIRAS2Q96HU8 199 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 C6orf62Q9GZU0 229 aaPredicted RBP13.54□□□□□ -0.24
CTSD-203ENST00000429746 ZNF430Q9H8G1 570 aaPredicted RBP13.54□□□□□ -0.24
CTSD-203ENST00000429746 GNB4Q9HAV0 340 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 PRELID3BQ9Y3B1 194 aa13.54□□□□□ -0.24
CTSD-203ENST00000429746 E7EUB6 86 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 G3V4G9 280 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 I3L521 148 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 NOL3O60936 208 aaKnown RBP13.53□□□□□ -0.24
CTSD-203ENST00000429746 HERV-K104P61576 105 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 POU2AF1Q16633 256 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 ZNF585BQ52M93 769 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 CXorf66Q5JRM2 361 aaPredicted RBP13.53□□□□□ -0.24
CTSD-203ENST00000429746 KHDC1LQ5JSQ8 128 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 C10orf55Q5SWW7 151 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 PYHIN1Q6K0P9 492 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 ZNF695Q8IW36 515 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 SPAG16Q8N0X2 631 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 TMEM229BQ8NBD8 167 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 KLHL30-AS1Q8NEE0 82 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 MCFD2Q8NI22 146 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 DCUN1D5Q9BTE7 237 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 RSRP1Q9BUV0 290 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 FOXA2Q9Y261 457 aaPredicted RBP13.53□□□□□ -0.24
CTSD-203ENST00000429746 A3GALT2U3KPV4 340 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 V9GYH0 126 aa13.53□□□□□ -0.24
CTSD-203ENST00000429746 A0A1W2PN81 502 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 CGB1A6NKQ9 187 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 RBMXL2O75526 392 aaKnown RBP13.52□□□□□ -0.25
CTSD-203ENST00000429746 CHRNA7P36544 502 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 RAB9AP51151 201 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 UCP3P55916 312 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 MRPS10P82664 201 aaKnown RBP13.52□□□□□ -0.25
CTSD-203ENST00000429746 FHL3Q13643 280 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 DEFB136Q30KP8 78 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 VMA21Q3ZAQ7 101 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 ACTBL2Q562R1 376 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 C1QL4Q86Z23 238 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 MRPL41Q8IXM3 137 aaKnown RBP13.52□□□□□ -0.25
CTSD-203ENST00000429746 TCTEX1D1Q8N7M0 179 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 GRPEL2Q8TAA5 225 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 TMEM167AQ8TBQ9 72 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 C15orf40Q8WUR7 153 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 FCAMRQ8WWV6 532 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 DUX3Q96PT4 197 aa13.52□□□□□ -0.25
CTSD-203ENST00000429746 GSTZ1O43708 216 aaPredicted RBP13.51□□□□□ -0.25
CTSD-203ENST00000429746 KBTBD11O94819 623 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 S1PR2O95136 353 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 RLN1P04808 185 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 TBPP20226 339 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 SLC6A1P30531 599 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 KIR2DS2P43631 304 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 RUNX1Q01196 453 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 SSBP1Q04837 148 aaKnown RBP13.51□□□□□ -0.25
CTSD-203ENST00000429746 CBX3Q13185 183 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 ZNF79Q15937 498 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 UNQ5815/PRO19632Q6UWF5 114 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 OR51H1Q8NH63 302 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 RHOVQ96L33 236 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 UBE2E2Q96LR5 201 aa13.51□□□□□ -0.25
CTSD-203ENST00000429746 TRAV3A0A0B4J244 114 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 TEX22C9J3V5 150 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 GPR31O00270 319 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 BRI3O95415 125 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 PF4V1P10720 104 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 MYOD1P15172 320 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 GNB1P62873 340 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 IL18Q14116 193 aa13.5□□□□□ -0.25
CTSD-203ENST00000429746 FAAP20Q6NZ36 180 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms