RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 POLDIP2Q9Y2S7 368 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 CDIPTO14735 213 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 TNFSF13O75888 250 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 TCF15Q12870 199 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 ASPHD2Q6ICH7 369 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 ZNF391Q9UJN7 358 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 ERVK-16P61578 105 aa16.02■□□□□ 0.16
PPFIA1-202ENST00000389547 OR5B3Q8NH48 314 aa16.02■□□□□ 0.16
PPFIA1-202ENST00000389547 GLRX2Q9NS18 164 aa16.02■□□□□ 0.16
PPFIA1-202ENST00000389547 IL3RAP26951 378 aa16.02■□□□□ 0.16
PPFIA1-202ENST00000389547 GNB2P62879 340 aa16.02■□□□□ 0.16
PPFIA1-202ENST00000389547 FGFBP3Q8TAT2 258 aa16.02■□□□□ 0.16
PPFIA1-202ENST00000389547 TMEM242Q9NWH2 141 aa16.02■□□□□ 0.16
PPFIA1-202ENST00000389547 A0A1B0GW64 132 aa16.02■□□□□ 0.15
PPFIA1-202ENST00000389547 SELENOHQ8IZQ5 122 aaKnown RBP16.02■□□□□ 0.15
PPFIA1-202ENST00000389547 TRAV39A0A0B4J263 110 aa16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 RNASEH2CQ8TDP1 164 aaKnown RBP16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 RNF2Q99496 336 aa16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 A0A0U1RQV5 110 aa16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 TAF15Q92804 592 aaKnown RBP eCLIP16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 WDYHV1Q96HA8 205 aa16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 RNFT1Q5M7Z0 435 aa16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 TMEM171Q8WVE6 324 aa16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 BCL2L2Q92843 193 aaPredicted RBP16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 TMEM147Q9BVK8 224 aa16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 VSIRQ9H7M9 311 aa16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 COL6A3P12111 3177 aa16.01■□□□□ 0.15
PPFIA1-202ENST00000389547 ACTL6BO94805 426 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 BHLHA15Q7RTS1 189 aaPredicted RBP16■□□□□ 0.15
PPFIA1-202ENST00000389547 OR51G1Q8NGK1 321 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 SPRR3Q9UBC9 169 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 IFNL4K9M1U5 179 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 C5orf63A6NC05 138 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 TMEM210A6NLX4 147 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 PROB1E7EW31 1015 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 OR7C2O60412 319 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 CAMPP49913 170 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 MZT1Q08AG7 82 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 FBLN7Q53RD9 439 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 GFRA1P56159 465 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 WDFY1Q8IWB7 410 aa16■□□□□ 0.15
PPFIA1-202ENST00000389547 TBL2Q9Y4P3 447 aaKnown RBP16■□□□□ 0.15
PPFIA1-202ENST00000389547 TMEM250H0YL14 139 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 VPS13AQ96RL7 3174 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 FAM90A2PQ658T7 463 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 OR8I2Q8N0Y5 310 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 GPR146Q96CH1 333 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 DECR2Q9NUI1 292 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 FAM157AC9JC47 383 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 SCTP09683 121 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 B3GALT5-AS1P59052 145 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 RFESDQ8TAC1 157 aa15.99■□□□□ 0.15
PPFIA1-202ENST00000389547 DPRXA6NFQ7 191 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 AHRRA9YTQ3 701 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 LCN2P80188 198 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 GABRA6Q16445 453 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 OR4A16Q8NH70 328 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 OTX1P32242 354 aaPredicted RBP15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 S100A7AQ86SG5 101 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 ST6GALNAC6Q969X2 333 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 HIPK2Q9H2X6 1198 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 SHANK1Q9Y566 2161 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 C3orf80F5H4A9 247 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 SH2D1BO14796 132 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 PDE6DO43924 150 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 GNG4P50150 75 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 RND2P52198 227 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 HIST3H3Q16695 136 aa15.98■□□□□ 0.15
PPFIA1-202ENST00000389547 ADMP35318 185 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 Q96M66 194 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 C1QTNF9BB2RNN3 333 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 BCL3P20749 454 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 WDR73Q6P4I2 378 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 PGPEP1LA6NFU8 196 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 WIPF3A6NGB9 483 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 FBLL1A6NHQ2 334 aaKnown RBP15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 F2RP25116 425 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 ZNF818PQ6ZRF7 136 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 FAM122AQ96E09 287 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 SELENOKQ9Y6D0 94 aa15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 NCOA6Q14686 2063 aaPredicted RBP15.97■□□□□ 0.15
PPFIA1-202ENST00000389547 WT1P19544 449 aaPredicted RBP15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 FAM19A2Q8N3H0 131 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 C9orf106Q8NAJ2 232 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 H1FXQ92522 213 aaKnown RBP15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 MSI2Q96DH6 328 aaKnown RBP15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 NUDT11Q96G61 164 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 ATG2AQ2TAZ0 1938 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 DNAH14Q0VDD8 3507 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 RIPPLY3P57055 190 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 PRAMEF5Q5TYX0 476 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 PRAMEF6Q5VXH4 476 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 TMEM211Q6ICI0 200 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 PIP4P1Q86T03 277 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 OR2D3Q8NGH3 330 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 CLN8Q9UBY8 286 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 C18orf12Q96KH6 178 aa15.96■□□□□ 0.15
PPFIA1-202ENST00000389547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.96■□□□□ 0.147e-7■□□□□ 10.5
PPFIA1-202ENST00000389547 GAGE10A6NGK3 116 aa15.96■□□□□ 0.14
PPFIA1-202ENST00000389547 SLC17A3O00476 420 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms