RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TMEM250H0YL14 139 aa13.41□□□□□ -0.26
MAP1LC3B-201ENST00000268607 TUSC2O75896 110 aa13.41□□□□□ -0.26
MAP1LC3B-201ENST00000268607 ACSF3Q4G176 576 aaPredicted RBP13.41□□□□□ -0.26
MAP1LC3B-201ENST00000268607 KCNIP4Q6PIL6 250 aa13.41□□□□□ -0.26
MAP1LC3B-201ENST00000268607 C1QTNF5Q9BXJ0 243 aa13.41□□□□□ -0.26
MAP1LC3B-201ENST00000268607 GPM6AP51674 278 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 HBG1P69891 147 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 HBG2P69892 147 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 VHLLQ6RSH7 139 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 TAF15Q92804 592 aaKnown RBP eCLIP13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 GSX1Q9H4S2 264 aaPredicted RBP13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 TP53TG3Q9ULZ0 132 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 RAXQ9Y2V3 346 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 M0QZ24 198 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 ADMP35318 185 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 COMPP49747 757 aaPredicted RBP13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 TPPP2P59282 170 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 OR10V1Q8NGI7 309 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 WDYHV1Q96HA8 205 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 REPIN1Q9BWE0 567 aaKnown RBP13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 FGF23Q9GZV9 251 aaPredicted RBP13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 IL36RNQ9UBH0 155 aa13.4□□□□□ -0.26
MAP1LC3B-201ENST00000268607 TRGV5A0A0B4J1U4 118 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 C1QTNF9BB2RNN3 333 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 LINC00310P59036 64 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 OR8G2PQ6IF36 304 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ACSM6Q6P461 480 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 UNQ5815/PRO19632Q6UWF5 114 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ZDHHC23Q8IYP9 409 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 TMEM178AQ8NBL3 297 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 CACNA1AO00555 2505 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 NAPSAO96009 420 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 BCL3P20749 454 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 LCN2P80188 198 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ABHD17AQ96GS6 310 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 LAMTOR2Q9Y2Q5 125 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 WIPI2Q9Y4P8 454 aa13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 INTS1Q8N201 2190 aaKnown RBP13.39□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PKD1L2Q7Z442 2459 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 TRAV34A0A0B4J273 112 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 CD300LBA8K4G0 201 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PAGE4O60829 102 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 IGKV1-39P01597 117 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 IGKV1D-39P04432 117 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SPATA46Q5T0L3 261 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 MRPL21Q7Z2W9 205 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 LINC00470Q9BZP3 86 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PRDM14Q9GZV8 571 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 RNF24Q9Y225 148 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ZFYVE26Q68DK2 2539 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SERF1AO75920 110 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 EGR1P18146 543 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 CLEC2AQ6UVW9 174 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 Q6ZS49 121 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 COLCA1Q6ZS62 124 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 RYDENQ9NUL5 291 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 RNF114Q9Y508 228 aa13.38□□□□□ -0.27
MAP1LC3B-201ENST00000268607 DEFA4P12838 97 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 NPPCP23582 126 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PAFAH1B2P68402 229 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 MAJINQ3KP22 176 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 Q6ZN92 141 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 OR5AU1Q8NGC0 362 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 TXN2Q99757 166 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 VPS25Q9BRG1 176 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PARD6GQ9BYG4 376 aaPredicted RBP13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 FAM87AP0C7U9 286 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SLC38A11Q08AI6 406 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SPSB4Q96A44 273 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ERRFI1Q9UJM3 462 aaPredicted RBP13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ZNF391Q9UJN7 358 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SLC45A2Q9UMX9 530 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ROS1P08922 2347 aa13.37□□□□□ -0.27
MAP1LC3B-201ENST00000268607 IGHV3-64DA0A0J9YX35 117 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SLC25A6P12236 298 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 BMP5P22003 454 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PPP1CBP62140 327 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PCSK4Q6UW60 755 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 C20orf204Q6ZNR8 217 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 MRGPRDQ8TDS7 321 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ZNF488Q96MN9 340 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 TRAV39A0A0B4J263 110 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 A0A1W2PN81 502 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 IGKV1-5P01602 117 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 S100GP29377 79 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 KRTDAPP60985 99 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SPATA45Q537H7 98 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 OR4C5Q8NGB2 326 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 OR10G9Q8NGN4 311 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 OR10G7Q8NGN6 311 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ATP23Q9Y6H3 246 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ESPL1Q14674 2120 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ICE1Q9Y2F5 2266 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 KIR2DS1A0A191URI9 304 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ZNF16P17020 682 aaPredicted RBP13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 KIR2DS4P43632 304 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 HINT1P49773 126 aaPredicted RBP13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 KIR2DS1Q14954 304 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 MSMO1Q15800 293 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 FFAR4Q5NUL3 377 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms