RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 NSUN4Q96CB9 384 aaKnown RBP23.28■■□□□ 1.32
LTBP4-223ENST00000598717 TTF2Q9UNY4 1162 aaKnown RBP23.28■■□□□ 1.32
LTBP4-223ENST00000598717 GJA3Q9Y6H8 435 aa23.28■■□□□ 1.32
LTBP4-223ENST00000598717 MAST3O60307 1309 aa23.28■■□□□ 1.32
LTBP4-223ENST00000598717 UBE3CQ15386 1083 aa23.27■■□□□ 1.32
LTBP4-223ENST00000598717 KIAA0825Q8IV33 1275 aa23.27■■□□□ 1.32
LTBP4-223ENST00000598717 AGBL3Q8NEM8 1001 aa23.27■■□□□ 1.32
LTBP4-223ENST00000598717 RUFY2Q8WXA3 655 aa23.27■■□□□ 1.32
LTBP4-223ENST00000598717 AK9Q5TCS8 1911 aa23.27■■□□□ 1.32
LTBP4-223ENST00000598717 ZNF532Q9HCE3 1301 aa23.27■■□□□ 1.32
LTBP4-223ENST00000598717 SRCAPQ6ZRS2 3230 aa23.27■■□□□ 1.32
LTBP4-223ENST00000598717 DICER1Q9UPY3 1922 aaKnown RBP23.26■■□□□ 1.31
LTBP4-223ENST00000598717 LDHCP07864 332 aa23.26■■□□□ 1.31
LTBP4-223ENST00000598717 CYP7A1P22680 504 aa23.26■■□□□ 1.31
LTBP4-223ENST00000598717 ZNF541Q9H0D2 1346 aa23.26■■□□□ 1.31
LTBP4-223ENST00000598717 RPS12P25398 132 aaKnown RBP23.25■■□□□ 1.31
LTBP4-223ENST00000598717 NMIQ13287 307 aaPredicted RBP23.25■■□□□ 1.31
LTBP4-223ENST00000598717 CWC27Q6UX04 472 aaKnown RBP23.25■■□□□ 1.31
LTBP4-223ENST00000598717 APPBP2Q92624 585 aa23.25■■□□□ 1.31
LTBP4-223ENST00000598717 ZBTB12Q9Y330 459 aaPredicted RBP23.25■■□□□ 1.31
LTBP4-223ENST00000598717 DOCK2Q92608 1830 aa23.24■■□□□ 1.31
LTBP4-223ENST00000598717 ZMYM1Q5SVZ6 1142 aa23.24■■□□□ 1.31
LTBP4-223ENST00000598717 GPC2Q8N158 579 aa23.24■■□□□ 1.31
LTBP4-223ENST00000598717 OGFOD1Q8N543 542 aa23.24■■□□□ 1.31
LTBP4-223ENST00000598717 HELLSQ9NRZ9 838 aa23.24■■□□□ 1.31
LTBP4-223ENST00000598717 HDAC9Q9UKV0 1011 aa23.24■■□□□ 1.31
LTBP4-223ENST00000598717 ZC3H4Q9UPT8 1303 aaKnown RBP23.24■■□□□ 1.31
LTBP4-223ENST00000598717 PSME4Q14997 1843 aa23.24■■□□□ 1.31
LTBP4-223ENST00000598717 GOLGB1Q14789 3259 aaKnown RBP23.23■■□□□ 1.31
LTBP4-223ENST00000598717 TCRBV5S4A2TA0A5A2 114 aa23.23■■□□□ 1.31
LTBP4-223ENST00000598717 CHGBP05060 677 aa23.23■■□□□ 1.31
LTBP4-223ENST00000598717 SCNN1DP51172 638 aa23.23■■□□□ 1.31
LTBP4-223ENST00000598717 DIXDC1Q155Q3 683 aa23.23■■□□□ 1.31
LTBP4-223ENST00000598717 SLFNL1Q499Z3 407 aa23.23■■□□□ 1.31
LTBP4-223ENST00000598717 DPY19L2Q6NUT2 758 aa23.23■■□□□ 1.31
LTBP4-223ENST00000598717 FAM227BQ96M60 508 aa23.23■■□□□ 1.31
LTBP4-223ENST00000598717 GMLQ99445 158 aa23.23■■□□□ 1.31
LTBP4-223ENST00000598717 NOL10Q9BSC4 688 aaKnown RBP23.23■■□□□ 1.31
LTBP4-223ENST00000598717 USP17L8P0C7I0 530 aa23.22■■□□□ 1.31
LTBP4-223ENST00000598717 HDLBPQ00341 1268 aaKnown RBP23.22■■□□□ 1.31
LTBP4-223ENST00000598717 MCMDC2Q4G0Z9 681 aa23.22■■□□□ 1.31
LTBP4-223ENST00000598717 ZNF384Q8TF68 577 aa23.22■■□□□ 1.31
LTBP4-223ENST00000598717 TEKT1Q969V4 418 aa23.22■■□□□ 1.31
LTBP4-223ENST00000598717 MYO5AQ9Y4I1 1855 aaKnown RBP23.22■■□□□ 1.31
LTBP4-223ENST00000598717 A0A0D9SFI3 127 aa23.21■■□□□ 1.31
LTBP4-223ENST00000598717 GMPSP49915 693 aaPredicted RBP23.21■■□□□ 1.31
LTBP4-223ENST00000598717 DPF2Q92785 391 aa23.21■■□□□ 1.31
LTBP4-223ENST00000598717 OSBP2Q969R2 916 aa23.21■■□□□ 1.31
LTBP4-223ENST00000598717 MRIQ9BWK5 157 aa23.21■■□□□ 1.31
LTBP4-223ENST00000598717 TIAM2Q8IVF5 1701 aa23.21■■□□□ 1.31
LTBP4-223ENST00000598717 MROH7-TTC4A0A0A0MT08 1334 aa23.2■■□□□ 1.3
LTBP4-223ENST00000598717 RAD50Q92878 1312 aa23.2■■□□□ 1.3
LTBP4-223ENST00000598717 CRKP46108 304 aa23.2■■□□□ 1.3
LTBP4-223ENST00000598717 MMP14P50281 582 aa23.2■■□□□ 1.3
LTBP4-223ENST00000598717 RBM5P52756 815 aaKnown RBP eCLIP23.2■■□□□ 1.3
LTBP4-223ENST00000598717 HHIPL2Q6UWX4 724 aa23.2■■□□□ 1.3
LTBP4-223ENST00000598717 AIDAQ96BJ3 306 aa23.2■■□□□ 1.3
LTBP4-223ENST00000598717 FAM163AQ96GL9 167 aaPredicted RBP23.2■■□□□ 1.3
LTBP4-223ENST00000598717 SEC62Q99442 399 aaKnown RBP23.2■■□□□ 1.3
LTBP4-223ENST00000598717 ESYT1Q9BSJ8 1104 aa23.2■■□□□ 1.3
LTBP4-223ENST00000598717 PUS7LQ9H0K6 701 aaKnown RBP23.2■■□□□ 1.3
LTBP4-223ENST00000598717 SERPINA10Q9UK55 444 aa23.2■■□□□ 1.3
LTBP4-223ENST00000598717 ZNF646O15015 1829 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-223ENST00000598717 MAST2Q6P0Q8 1798 aa23.19■■□□□ 1.3
LTBP4-223ENST00000598717 MAGEB6P1A0A0J9YX57 407 aa23.19■■□□□ 1.3
LTBP4-223ENST00000598717 EIF5BO60841 1220 aaKnown RBP23.19■■□□□ 1.3
LTBP4-223ENST00000598717 BAG3O95817 575 aa23.19■■□□□ 1.3
LTBP4-223ENST00000598717 MFAP1P55081 439 aaKnown RBP23.19■■□□□ 1.3
LTBP4-223ENST00000598717 C8orf34Q49A92 452 aa23.19■■□□□ 1.3
LTBP4-223ENST00000598717 ADGRA1Q86SQ6 560 aa23.19■■□□□ 1.3
LTBP4-223ENST00000598717 MIGA1Q8NAN2 632 aa23.19■■□□□ 1.3
LTBP4-223ENST00000598717 MYH7P12883 1935 aa23.19■■□□□ 1.3
LTBP4-223ENST00000598717 M0R2C6 588 aa23.18■■□□□ 1.3
LTBP4-223ENST00000598717 SGSM2O43147 1006 aa23.18■■□□□ 1.3
LTBP4-223ENST00000598717 DDNO94850 711 aaPredicted RBP23.18■■□□□ 1.3
LTBP4-223ENST00000598717 DAGLAQ9Y4D2 1042 aa23.18■■□□□ 1.3
LTBP4-223ENST00000598717 GAKO14976 1311 aa23.17■■□□□ 1.3
LTBP4-223ENST00000598717 BTDP43251 543 aa23.17■■□□□ 1.3
LTBP4-223ENST00000598717 CERS3Q8IU89 383 aa23.17■■□□□ 1.3
LTBP4-223ENST00000598717 AATFQ9NY61 560 aaKnown RBP eCLIP23.17■■□□□ 1.3
LTBP4-223ENST00000598717 CNOT7Q9UIV1 285 aaKnown RBP23.17■■□□□ 1.3
LTBP4-223ENST00000598717 GPR75-ASB3A0A0A6YYF3 556 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 H7C1D1 291 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 GPAA1O43292 621 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 MBD4O95243 580 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 CFAP100Q494V2 611 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 CCDC129Q6ZRS4 1044 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 KIAA1211Q6ZU35 1233 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 MICALL2Q8IY33 904 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 ZDHHC15Q96MV8 337 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 ARMT1Q9H993 441 aa23.16■■□□□ 1.3
LTBP4-223ENST00000598717 CCDC171Q6TFL3 1326 aa23.15■■□□□ 1.3
LTBP4-223ENST00000598717 GLTPD2A6NH11 291 aa23.15■■□□□ 1.3
LTBP4-223ENST00000598717 PLCG2P16885 1265 aa23.15■■□□□ 1.3
LTBP4-223ENST00000598717 LMOD1P29536 600 aaPredicted RBP23.15■■□□□ 1.3
LTBP4-223ENST00000598717 ZNF280AP59817 542 aaPredicted RBP23.15■■□□□ 1.3
LTBP4-223ENST00000598717 PPP4CP60510 307 aa23.15■■□□□ 1.3
LTBP4-223ENST00000598717 DYNLL1P63167 89 aaKnown RBP23.15■■□□□ 1.3
LTBP4-223ENST00000598717 DLGAP5Q15398 846 aa23.15■■□□□ 1.3
LTBP4-223ENST00000598717 ZNF589Q86UQ0 364 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms