RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 EIF5BO60841 1220 aaKnown RBP20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 HDLBPQ00341 1268 aaKnown RBP20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 UBE3CQ15386 1083 aa20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 TBC1D9Q6ZT07 1266 aa20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 CERS3Q8IU89 383 aa20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 OGFOD1Q8N543 542 aa20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 DPF2Q92785 391 aa20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 EDC3Q96F86 508 aaKnown RBP20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 MRIQ9BWK5 157 aa20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 KCNQ5Q9NR82 932 aa20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 HDAC9Q9UKV0 1011 aa20.5■□□□□ 0.87
SCAMP4-211ENST00000588907 LDHCP07864 332 aa20.49■□□□□ 0.87
SCAMP4-211ENST00000588907 PRDX5P30044 214 aa20.49■□□□□ 0.87
SCAMP4-211ENST00000588907 SLC9C2Q5TAH2 1124 aa20.49■□□□□ 0.87
SCAMP4-211ENST00000588907 NAA16Q6N069 864 aaPredicted RBP20.49■□□□□ 0.87
SCAMP4-211ENST00000588907 RNF113AO15541 343 aaKnown RBP20.48■□□□□ 0.87
SCAMP4-211ENST00000588907 CDC45O75419 566 aa20.48■□□□□ 0.87
SCAMP4-211ENST00000588907 ADD2P35612 726 aa20.48■□□□□ 0.87
SCAMP4-211ENST00000588907 CERS5Q8N5B7 392 aa20.48■□□□□ 0.87
SCAMP4-211ENST00000588907 NSUN4Q96CB9 384 aaKnown RBP20.48■□□□□ 0.87
SCAMP4-211ENST00000588907 GMLQ99445 158 aa20.48■□□□□ 0.87
SCAMP4-211ENST00000588907 DIAPH3Q9NSV4 1193 aa20.48■□□□□ 0.87
SCAMP4-211ENST00000588907 TTF2Q9UNY4 1162 aaKnown RBP20.48■□□□□ 0.87
SCAMP4-211ENST00000588907 ZNF541Q9H0D2 1346 aa20.48■□□□□ 0.87
SCAMP4-211ENST00000588907 PDE6AP16499 860 aa20.47■□□□□ 0.87
SCAMP4-211ENST00000588907 MECOMQ03112 1051 aa20.47■□□□□ 0.87
SCAMP4-211ENST00000588907 MAGEB6Q8N7X4 407 aa20.47■□□□□ 0.87
SCAMP4-211ENST00000588907 RUFY2Q8WXA3 655 aa20.47■□□□□ 0.87
SCAMP4-211ENST00000588907 SERPINA10Q9UK55 444 aa20.47■□□□□ 0.87
SCAMP4-211ENST00000588907 USP17L8P0C7I0 530 aa20.46■□□□□ 0.87
SCAMP4-211ENST00000588907 HHIPL2Q6UWX4 724 aa20.46■□□□□ 0.87
SCAMP4-211ENST00000588907 KIAA0825Q8IV33 1275 aa20.46■□□□□ 0.87
SCAMP4-211ENST00000588907 APPBP2Q92624 585 aa20.46■□□□□ 0.87
SCAMP4-211ENST00000588907 TEKT1Q969V4 418 aa20.46■□□□□ 0.87
SCAMP4-211ENST00000588907 FAM163AQ96GL9 167 aaPredicted RBP20.46■□□□□ 0.87
SCAMP4-211ENST00000588907 NOL10Q9BSC4 688 aaKnown RBP20.46■□□□□ 0.87
SCAMP4-211ENST00000588907 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
SCAMP4-211ENST00000588907 RAD50Q92878 1312 aa20.46■□□□□ 0.87
SCAMP4-211ENST00000588907 MYO5AQ9Y4I1 1855 aaKnown RBP20.45■□□□□ 0.86
SCAMP4-211ENST00000588907 HELLSQ9NRZ9 838 aa20.45■□□□□ 0.86
SCAMP4-211ENST00000588907 CYP7A1P22680 504 aa20.44■□□□□ 0.86
SCAMP4-211ENST00000588907 GMPSP49915 693 aaPredicted RBP20.44■□□□□ 0.86
SCAMP4-211ENST00000588907 MFAP1P55081 439 aaKnown RBP20.44■□□□□ 0.86
SCAMP4-211ENST00000588907 MXD3Q9BW11 206 aa20.44■□□□□ 0.86
SCAMP4-211ENST00000588907 MROH7-TTC4A0A0A0MT08 1334 aa20.44■□□□□ 0.86
SCAMP4-211ENST00000588907 GAKO14976 1311 aa20.44■□□□□ 0.86
SCAMP4-211ENST00000588907 ZNF532Q9HCE3 1301 aa20.44■□□□□ 0.86
SCAMP4-211ENST00000588907 MYH2Q9UKX2 1941 aa20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 TCRBV5S4A2TA0A5A2 114 aa20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 GLTPD2A6NH11 291 aa20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 F8W031 263 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 BAG3O95817 575 aa20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 PLCG2P16885 1265 aa20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 CHMLP26374 656 aa20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 LMOD1P29536 600 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 ZNF280AP59817 542 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 ZMYM1Q5SVZ6 1142 aa20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 L3MBTL3Q96JM7 780 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-211ENST00000588907 H7C1D1 291 aa20.42■□□□□ 0.86
SCAMP4-211ENST00000588907 MTMR14Q8NCE2 650 aa20.42■□□□□ 0.86
SCAMP4-211ENST00000588907 ZDHHC15Q96MV8 337 aa20.42■□□□□ 0.86
SCAMP4-211ENST00000588907 GPRC5DQ9NZD1 345 aa20.42■□□□□ 0.86
SCAMP4-211ENST00000588907 ZBTB12Q9Y330 459 aaPredicted RBP20.42■□□□□ 0.86
SCAMP4-211ENST00000588907 IQCA1LA6NCM1 817 aa20.41■□□□□ 0.86
SCAMP4-211ENST00000588907 CRKP46108 304 aa20.41■□□□□ 0.86
SCAMP4-211ENST00000588907 GRIK5Q16478 980 aa20.41■□□□□ 0.86
SCAMP4-211ENST00000588907 MCMDC2Q4G0Z9 681 aa20.41■□□□□ 0.86
SCAMP4-211ENST00000588907 GPR75-ASB3A0A0A6YYF3 556 aa20.4■□□□□ 0.86
SCAMP4-211ENST00000588907 PPP4CP60510 307 aa20.4■□□□□ 0.86
SCAMP4-211ENST00000588907 DIXDC1Q155Q3 683 aa20.4■□□□□ 0.86
SCAMP4-211ENST00000588907 MICALL2Q8IY33 904 aa20.4■□□□□ 0.86
SCAMP4-211ENST00000588907 ZNF384Q8TF68 577 aa20.4■□□□□ 0.86
SCAMP4-211ENST00000588907 AIDAQ96BJ3 306 aa20.4■□□□□ 0.86
SCAMP4-211ENST00000588907 CNOT7Q9UIV1 285 aaKnown RBP20.4■□□□□ 0.86
SCAMP4-211ENST00000588907 SCN4AP35499 1836 aa20.39■□□□□ 0.86
SCAMP4-211ENST00000588907 MAGEB6P1A0A0J9YX57 407 aa20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 MYO1BO43795 1136 aa20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 GNAT2P19087 354 aa20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 SCNN1DP51172 638 aa20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 RBM5P52756 815 aaKnown RBP eCLIP20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 NMIQ13287 307 aaPredicted RBP20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 DLGAP5Q15398 846 aa20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 CWC27Q6UX04 472 aaKnown RBP20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 MYOZ2Q9NPC6 264 aa20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 DAGLAQ9Y4D2 1042 aa20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 WDR90Q96KV7 1748 aa20.39■□□□□ 0.85
SCAMP4-211ENST00000588907 CFAP100Q494V2 611 aa20.38■□□□□ 0.85
SCAMP4-211ENST00000588907 RPAP1Q9BWH6 1393 aaPredicted RBP20.37■□□□□ 0.85
SCAMP4-211ENST00000588907 A0A0D9SFI3 127 aa20.37■□□□□ 0.85
SCAMP4-211ENST00000588907 SPDYE2BA6NHP3 402 aa20.37■□□□□ 0.85
SCAMP4-211ENST00000588907 SPDYE6P0CI01 402 aa20.37■□□□□ 0.85
SCAMP4-211ENST00000588907 BTDP43251 543 aa20.37■□□□□ 0.85
SCAMP4-211ENST00000588907 OSBP2Q969R2 916 aa20.37■□□□□ 0.85
SCAMP4-211ENST00000588907 FAM227BQ96M60 508 aa20.37■□□□□ 0.85
SCAMP4-211ENST00000588907 ADARB2Q9NS39 739 aaKnown RBP20.37■□□□□ 0.85
SCAMP4-211ENST00000588907 CCDC171Q6TFL3 1326 aa20.36■□□□□ 0.85
SCAMP4-211ENST00000588907 SGSM2O43147 1006 aa20.36■□□□□ 0.85
SCAMP4-211ENST00000588907 REC8O95072 547 aa20.36■□□□□ 0.85
SCAMP4-211ENST00000588907 ADGRA1Q86SQ6 560 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms