RNA–Protein interactions for RNA: ENST00000580539.2

RN7SL716P-201, Transcript of RNA, 7SL, cytoplasmic 716, pseudogene, humanhuman

BASIC

Gene RN7SL716P, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL716P-201ENST00000580539 GCKRQ14397 625 aa12.35□□□□□ -0.43
RN7SL716P-201ENST00000580539 APOBEC3FQ8IUX4 373 aaKnown RBP12.35□□□□□ -0.43
RN7SL716P-201ENST00000580539 ZBED3Q96IU2 234 aaPredicted RBP12.35□□□□□ -0.43
RN7SL716P-201ENST00000580539 KRTAP3-3Q9BYR6 98 aa12.35□□□□□ -0.43
RN7SL716P-201ENST00000580539 KRTAP3-2Q9BYR7 98 aa12.35□□□□□ -0.43
RN7SL716P-201ENST00000580539 CHMP3Q9Y3E7 222 aa12.35□□□□□ -0.43
RN7SL716P-201ENST00000580539 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
RN7SL716P-201ENST00000580539 USP2O75604 605 aaPredicted RBP12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 EN2P19622 333 aaPredicted RBP12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 TWISTNBQ3B726 338 aaPredicted RBP12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 CFAP100Q494V2 611 aa12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 CCDC184Q52MB2 194 aa12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 OTOP1Q7RTM1 612 aa12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 CD99L2Q8TCZ2 262 aa12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 WNK4Q96J92 1243 aa12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 ZNF594Q96JF6 807 aaPredicted RBP12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 PRKRIP1Q9H875 184 aaPredicted RBP12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 AKAP11Q9UKA4 1901 aa12.34□□□□□ -0.43
RN7SL716P-201ENST00000580539 ANKRD18BA2A2Z9 1011 aa12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 MANSC4A6NHS7 340 aaPredicted RBP12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 ALDH1A1P00352 501 aa12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 CSF1RP07333 972 aa12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 GJA5P36382 358 aa12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 INHBEP58166 350 aa12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 CAP1Q01518 475 aa12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 PTPN18Q99952 460 aa12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 PAPPA2Q9BXP8 1791 aa12.33□□□□□ -0.44
RN7SL716P-201ENST00000580539 ZNF609O15014 1411 aa12.32□□□□□ -0.44
RN7SL716P-201ENST00000580539 CASP7P55210 303 aa12.32□□□□□ -0.44
RN7SL716P-201ENST00000580539 CRHR2Q13324 411 aa12.32□□□□□ -0.44
RN7SL716P-201ENST00000580539 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
RN7SL716P-201ENST00000580539 RASA3Q14644 834 aa12.32□□□□□ -0.44
RN7SL716P-201ENST00000580539 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
RN7SL716P-201ENST00000580539 NOM1Q5C9Z4 860 aaKnown RBP12.32□□□□□ -0.44
RN7SL716P-201ENST00000580539 ELP3Q9H9T3 547 aa12.32□□□□□ -0.44
RN7SL716P-201ENST00000580539 PTPN22Q9Y2R2 807 aa12.32□□□□□ -0.44
RN7SL716P-201ENST00000580539 F6X3S4 739 aa12.31□□□□□ -0.44
RN7SL716P-201ENST00000580539 MYO1BO43795 1136 aa12.31□□□□□ -0.44
RN7SL716P-201ENST00000580539 FLIIQ13045 1269 aa12.31□□□□□ -0.44
RN7SL716P-201ENST00000580539 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
RN7SL716P-201ENST00000580539 DNAAF4Q8WXU2 420 aa12.31□□□□□ -0.44
RN7SL716P-201ENST00000580539 CFHR5Q9BXR6 569 aa12.31□□□□□ -0.44
RN7SL716P-201ENST00000580539 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
RN7SL716P-201ENST00000580539 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
RN7SL716P-201ENST00000580539 PDE4DIPQ5VU43 2346 aa12.31□□□□□ -0.44
RN7SL716P-201ENST00000580539 FOXO4P98177 505 aa12.3□□□□□ -0.44
RN7SL716P-201ENST00000580539 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
RN7SL716P-201ENST00000580539 MAP3K11Q16584 847 aa12.3□□□□□ -0.44
RN7SL716P-201ENST00000580539 EPHA10Q5JZY3 1008 aa12.3□□□□□ -0.44
RN7SL716P-201ENST00000580539 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
RN7SL716P-201ENST00000580539 PLA2G12BQ9BX93 195 aa12.3□□□□□ -0.44
RN7SL716P-201ENST00000580539 EFCC1Q9HA90 598 aa12.3□□□□□ -0.44
RN7SL716P-201ENST00000580539 TCP10L2B9ZVM9 353 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 ZBTB48P10074 688 aaPredicted RBP12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 IREB2P48200 963 aaKnown RBP12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 MMP14P50281 582 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 SP3Q02447 781 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 OTUD7BQ6GQQ9 843 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 ZNF804AQ7Z570 1209 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 WWC1Q8IX03 1113 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 ANKRD13AQ8IZ07 590 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 LINS1Q8NG48 757 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 OPTNQ96CV9 577 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 ERO1AQ96HE7 468 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 MYH16Q9H6N6 1097 aa12.29□□□□□ -0.44
RN7SL716P-201ENST00000580539 IL1R1P14778 569 aa12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 GYG1P46976 350 aa12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 INTS3Q68E01 1043 aaKnown RBP12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 MTMR14Q8NCE2 650 aa12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 ZNF70Q9UC06 446 aaPredicted RBP12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 TTF2Q9UNY4 1162 aaKnown RBP12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 IQSEC3Q9UPP2 1182 aaPredicted RBP12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 IRS2Q9Y4H2 1338 aa12.28□□□□□ -0.44
RN7SL716P-201ENST00000580539 VAMP4O75379 141 aa12.27□□□□□ -0.45
RN7SL716P-201ENST00000580539 GRIK5Q16478 980 aa12.27□□□□□ -0.45
RN7SL716P-201ENST00000580539 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
RN7SL716P-201ENST00000580539 GCC1Q96CN9 775 aa12.27□□□□□ -0.45
RN7SL716P-201ENST00000580539 PUS3Q9BZE2 481 aaKnown RBP12.27□□□□□ -0.45
RN7SL716P-201ENST00000580539 TMEM39BQ9GZU3 492 aa12.27□□□□□ -0.45
RN7SL716P-201ENST00000580539 SSC5DA1L4H1 1573 aa12.26□□□□□ -0.45
RN7SL716P-201ENST00000580539 CACNB3P54284 484 aa12.26□□□□□ -0.45
RN7SL716P-201ENST00000580539 EXOSC9Q06265 439 aaKnown RBP12.26□□□□□ -0.45
RN7SL716P-201ENST00000580539 SLC4A8Q2Y0W8 1093 aa12.26□□□□□ -0.45
RN7SL716P-201ENST00000580539 MFSD14BQ5SR56 506 aa12.26□□□□□ -0.45
RN7SL716P-201ENST00000580539 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.26□□□□□ -0.45
RN7SL716P-201ENST00000580539 MS4A4AQ96JQ5 239 aa12.26□□□□□ -0.45
RN7SL716P-201ENST00000580539 PPP2R3BQ9Y5P8 575 aa12.26□□□□□ -0.45
RN7SL716P-201ENST00000580539 CCL15-CCL14A0A0B4J2E2 113 aa12.25□□□□□ -0.45
RN7SL716P-201ENST00000580539 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
RN7SL716P-201ENST00000580539 HIBADHP31937 336 aaKnown RBP12.25□□□□□ -0.45
RN7SL716P-201ENST00000580539 TAF1CQ15572 869 aaPredicted RBP12.25□□□□□ -0.45
RN7SL716P-201ENST00000580539 CCL15Q16663 113 aa12.25□□□□□ -0.45
RN7SL716P-201ENST00000580539 BEND3Q5T5X7 828 aa12.25□□□□□ -0.45
RN7SL716P-201ENST00000580539 SLC4A10Q6U841 1118 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms