RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 DICER1Q9UPY3 1922 aaKnown RBP12.93□□□□□ -0.34
SS18-213ENST00000579640 TCRBV5S4A2TA0A5A2 114 aa12.93□□□□□ -0.34
SS18-213ENST00000579640 REC8O95072 547 aa12.93□□□□□ -0.34
SS18-213ENST00000579640 PRDX5P30044 214 aa12.93□□□□□ -0.34
SS18-213ENST00000579640 MFAP1P55081 439 aaKnown RBP12.93□□□□□ -0.34
SS18-213ENST00000579640 GPR162Q16538 588 aa12.93□□□□□ -0.34
SS18-213ENST00000579640 NAA16Q6N069 864 aaPredicted RBP12.93□□□□□ -0.34
SS18-213ENST00000579640 SLF2Q8IX21 1173 aa12.93□□□□□ -0.34
SS18-213ENST00000579640 NSUN4Q96CB9 384 aaKnown RBP12.93□□□□□ -0.34
SS18-213ENST00000579640 FAM227BQ96M60 508 aa12.93□□□□□ -0.34
SS18-213ENST00000579640 A0A0D9SFI3 127 aa12.92□□□□□ -0.34
SS18-213ENST00000579640 LDHCP07864 332 aa12.92□□□□□ -0.34
SS18-213ENST00000579640 MECOMQ03112 1051 aa12.92□□□□□ -0.34
SS18-213ENST00000579640 EPB41L2O43491 1005 aaKnown RBP12.92□□□□□ -0.34
SS18-213ENST00000579640 VIL1P09327 827 aaKnown RBP12.92□□□□□ -0.34
SS18-213ENST00000579640 CYP7A1P22680 504 aa12.92□□□□□ -0.34
SS18-213ENST00000579640 TNIP1Q15025 636 aa12.92□□□□□ -0.34
SS18-213ENST00000579640 KCNQ5Q9NR82 932 aa12.92□□□□□ -0.34
SS18-213ENST00000579640 SBF1O95248 1867 aa12.92□□□□□ -0.34
SS18-213ENST00000579640 FZD9O00144 591 aa12.91□□□□□ -0.34
SS18-213ENST00000579640 PRELPP51888 382 aa12.91□□□□□ -0.34
SS18-213ENST00000579640 EIF6P56537 245 aaKnown RBP12.91□□□□□ -0.34
SS18-213ENST00000579640 CIAPIN1Q6FI81 312 aa12.91□□□□□ -0.34
SS18-213ENST00000579640 RSBN1LQ6PCB5 846 aaPredicted RBP12.91□□□□□ -0.34
SS18-213ENST00000579640 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
SS18-213ENST00000579640 CERS3Q8IU89 383 aa12.91□□□□□ -0.34
SS18-213ENST00000579640 CERS5Q8N5B7 392 aa12.91□□□□□ -0.34
SS18-213ENST00000579640 OSBP2Q969R2 916 aa12.91□□□□□ -0.34
SS18-213ENST00000579640 MRIQ9BWK5 157 aa12.91□□□□□ -0.34
SS18-213ENST00000579640 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
SS18-213ENST00000579640 CCDC171Q6TFL3 1326 aa12.91□□□□□ -0.34
SS18-213ENST00000579640 PSMD14O00487 310 aa12.9□□□□□ -0.34
SS18-213ENST00000579640 RAD17O75943 681 aa12.9□□□□□ -0.34
SS18-213ENST00000579640 CHGBP05060 677 aa12.9□□□□□ -0.34
SS18-213ENST00000579640 MMP14P50281 582 aa12.9□□□□□ -0.34
SS18-213ENST00000579640 HDLBPQ00341 1268 aaKnown RBP12.9□□□□□ -0.34
SS18-213ENST00000579640 CXCL9Q07325 125 aa12.9□□□□□ -0.34
SS18-213ENST00000579640 AGBL3Q8NEM8 1001 aa12.9□□□□□ -0.34
SS18-213ENST00000579640 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.34
SS18-213ENST00000579640 GRIK5Q16478 980 aa12.9□□□□□ -0.34
SS18-213ENST00000579640 ZNF384Q8TF68 577 aa12.9□□□□□ -0.34
SS18-213ENST00000579640 AIDAQ96BJ3 306 aa12.9□□□□□ -0.34
SS18-213ENST00000579640 PUS7LQ9H0K6 701 aaKnown RBP12.9□□□□□ -0.34
SS18-213ENST00000579640 TTF2Q9UNY4 1162 aaKnown RBP12.9□□□□□ -0.34
SS18-213ENST00000579640 MROH7-TTC4A0A0A0MT08 1334 aa12.89□□□□□ -0.35
SS18-213ENST00000579640 M0R2C6 588 aa12.89□□□□□ -0.35
SS18-213ENST00000579640 SEC24BO95487 1268 aa12.89□□□□□ -0.35
SS18-213ENST00000579640 RPS12P25398 132 aaKnown RBP12.89□□□□□ -0.35
SS18-213ENST00000579640 SLFNL1Q499Z3 407 aa12.89□□□□□ -0.35
SS18-213ENST00000579640 SEC62Q99442 399 aaKnown RBP12.89□□□□□ -0.35
SS18-213ENST00000579640 NOL10Q9BSC4 688 aaKnown RBP12.89□□□□□ -0.35
SS18-213ENST00000579640 MXD3Q9BW11 206 aa12.89□□□□□ -0.35
SS18-213ENST00000579640 IL25Q9H293 177 aa12.89□□□□□ -0.35
SS18-213ENST00000579640 ANO2Q9NQ90 1003 aa12.89□□□□□ -0.35
SS18-213ENST00000579640 GAKO14976 1311 aa12.89□□□□□ -0.35
SS18-213ENST00000579640 MYH2Q9UKX2 1941 aa12.89□□□□□ -0.35
SS18-213ENST00000579640 MAGEB6P1A0A0J9YX57 407 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 GPAA1O43292 621 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 BAG3O95817 575 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 GNAT2P19087 354 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 HHIPL2Q6UWX4 724 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 ZNF589Q86UQ0 364 aaPredicted RBP12.88□□□□□ -0.35
SS18-213ENST00000579640 GMLQ99445 158 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 F8W031 263 aaPredicted RBP12.88□□□□□ -0.35
SS18-213ENST00000579640 MBD4O95243 580 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 PPP4CP60510 307 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 DIXDC1Q155Q3 683 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 ADGRA1Q86SQ6 560 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 STRBPQ96SI9 672 aaKnown RBP12.88□□□□□ -0.35
SS18-213ENST00000579640 DSCC1Q9BVC3 393 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 LSG1Q9H089 658 aaKnown RBP12.88□□□□□ -0.35
SS18-213ENST00000579640 RNF181Q9P0P0 153 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 HDAC9Q9UKV0 1011 aa12.88□□□□□ -0.35
SS18-213ENST00000579640 ZC3H4Q9UPT8 1303 aaKnown RBP12.87□□□□□ -0.35
SS18-213ENST00000579640 TIAM2Q8IVF5 1701 aa12.87□□□□□ -0.35
SS18-213ENST00000579640 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
SS18-213ENST00000579640 GPR75-ASB3A0A0A6YYF3 556 aa12.87□□□□□ -0.35
SS18-213ENST00000579640 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
SS18-213ENST00000579640 PLCG2P16885 1265 aa12.87□□□□□ -0.35
SS18-213ENST00000579640 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
SS18-213ENST00000579640 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
SS18-213ENST00000579640 RIOK1Q9BRS2 568 aaKnown RBP12.87□□□□□ -0.35
SS18-213ENST00000579640 USP26Q9BXU7 913 aa12.87□□□□□ -0.35
SS18-213ENST00000579640 CRKP46108 304 aa12.86□□□□□ -0.35
SS18-213ENST00000579640 LCORLQ8N3X6 602 aa12.86□□□□□ -0.35
SS18-213ENST00000579640 OGFOD1Q8N543 542 aa12.86□□□□□ -0.35
SS18-213ENST00000579640 MIGA1Q8NAN2 632 aa12.86□□□□□ -0.35
SS18-213ENST00000579640 DPF2Q92785 391 aa12.86□□□□□ -0.35
SS18-213ENST00000579640 MAP4K1Q92918 833 aa12.86□□□□□ -0.35
SS18-213ENST00000579640 DAGLAQ9Y4D2 1042 aa12.86□□□□□ -0.35
SS18-213ENST00000579640 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
SS18-213ENST00000579640 USP17L8P0C7I0 530 aa12.85□□□□□ -0.35
SS18-213ENST00000579640 HSPD1P10809 573 aaKnown RBP12.85□□□□□ -0.35
SS18-213ENST00000579640 MCCP23508 829 aa12.85□□□□□ -0.35
SS18-213ENST00000579640 BTDP43251 543 aa12.85□□□□□ -0.35
SS18-213ENST00000579640 GPC2Q8N158 579 aa12.85□□□□□ -0.35
SS18-213ENST00000579640 ZDHHC15Q96MV8 337 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms