RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 NOP9Q86U38 636 aaKnown RBP10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 ZNF483Q8TF39 744 aaPredicted RBP10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 TAF4BQ92750 862 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 ARHGAP35Q9NRY4 1499 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 GJB2P29033 226 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 FAM173BQ6P4H8 233 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 CACTINQ8WUQ7 758 aaKnown RBP10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 TEKT1Q969V4 418 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 NAP1L3Q99457 506 aaPredicted RBP10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 A0A087WWV3 80 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 OPHN1O60890 802 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 MLH1P40692 756 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 USP33Q8TEY7 942 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 TEKT4Q8WW24 435 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 MTA3Q9BTC8 594 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 MYO1AQ9UBC5 1043 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 EFCAB8A8MWE9 144 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 LMOD1P29536 600 aaPredicted RBP10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 SLFN5Q08AF3 891 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 RNF10Q8N5U6 811 aaKnown RBP10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 JADE2Q9NQC1 790 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 MARCH6O60337 910 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 N4BP1O75113 896 aaKnown RBP10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 HMOX1P09601 288 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 ADCY1Q08828 1119 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 IFFO1Q0D2I5 559 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 TBC1D8BQ0IIM8 1120 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 PSMD6Q15008 389 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 SOS1Q07889 1333 aaPredicted RBP10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 PPP2R1AP30153 589 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 KLC1Q07866 573 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 ZNF569Q5MCW4 686 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 CDC37L1Q7L3B6 337 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 DTNBP1Q96EV8 351 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 TCEANC2Q96MN5 208 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 CBX8Q9HC52 389 aa10.12□□□□□ -0.79
GTF2A1-203ENST00000553612 POLR2FP61218 127 aaKnown RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 GOLGA8FQ08AF8 430 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 GOLGA8DPQ0D2H9 430 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 C16orf71Q8IYS4 520 aaPredicted RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 ZSCAN16Q9H4T2 348 aaPredicted RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 PRM3Q9NNZ6 103 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 IL1RAPL2Q9NP60 686 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 CCDC18Q5T9S5 1454 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 DIAPH2O60879 1101 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 CD2BP2O95400 341 aaKnown RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 MIER3Q7Z3K6 550 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 RAB11FIP4Q86YS3 637 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 NSMCE1Q8WV22 266 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 P4HA2O15460 535 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 EEF2P13639 858 aaKnown RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 SMCR8Q8TEV9 937 aaPredicted RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 CEP63Q96MT8 703 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 IVNS1ABPQ9Y6Y0 642 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 NAT2P11245 290 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 PLEKHO1Q53GL0 409 aaPredicted RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 CFAP157Q5JU67 520 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 C1orf228Q6PIY5 440 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 C14orf80Q86SX3 495 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 SELENOSQ9BQE4 189 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 CFDP1Q9UEE9 299 aaPredicted RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 STX6O43752 255 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 TMED10P49755 219 aaKnown RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 GSCP56915 257 aaPredicted RBP10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 SIKE1Q9BRV8 207 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 IFNKQ9P0W0 207 aa10.11□□□□□ -0.79
GTF2A1-203ENST00000553612 FAM200BP0CF97 657 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 ALOX15P16050 662 aaPredicted RBP10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 KCNA2P16389 499 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 PCYT1AP49585 367 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 SFSWAPQ12872 951 aaKnown RBP10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 NMIQ13287 307 aaPredicted RBP10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 IQCB1Q15051 598 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 TRIM7Q9C029 511 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 FMN1Q68DA7 1419 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 SPECC1L-ADORA2AF8WAN1 911 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 DNAJC8O75937 253 aaPredicted RBP10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 GPTP24298 496 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 CCDC144BQ3MJ40 725 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 FAAH2Q6GMR7 532 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 TBC1D1Q86TI0 1168 aaPredicted RBP10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 LRRC8AQ8IWT6 810 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 GPATCH3Q96I76 525 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 PSMD7P51665 324 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 LONP2Q86WA8 852 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 HIP1RO75146 1068 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 SETDB1Q15047 1291 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 FAM47EQ6ZV65 393 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 TTC30BQ8N4P2 665 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 IFT81Q8WYA0 676 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 NOP53Q9NZM5 478 aaKnown RBP10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 SEL1LQ9UBV2 794 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 M0R2C6 588 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 CBFA2T2O43439 604 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 BRD3Q15059 726 aa10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 ESF1Q9H501 851 aaKnown RBP10.1□□□□□ -0.79
GTF2A1-203ENST00000553612 ZMYND10O75800 440 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 MYCLP1P12525 358 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms