RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 CLEC17AQ6ZS10 378 aa12.97□□□□□ -0.33
PCDHGB4-201ENST00000519479 CBX8Q9HC52 389 aa12.97□□□□□ -0.33
PCDHGB4-201ENST00000519479 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
PCDHGB4-201ENST00000519479 SHPRHQ149N8 1683 aa12.97□□□□□ -0.33
PCDHGB4-201ENST00000519479 PCCAP05165 728 aaPredicted RBP12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 ST5P78524 1137 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 IFIT1BQ5T764 474 aaKnown RBP12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 ZBTB38Q8NAP3 1195 aaPredicted RBP12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 ARMT1Q9H993 441 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 MAGEB6P1A0A0J9YX57 407 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 HSP90AA4PQ58FG1 418 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 CCDC70Q6NSX1 233 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 LPIN2Q92539 896 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 NLRP3Q96P20 1036 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 PFKFB2O60825 505 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 ADORA1P30542 326 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 PDE4BQ07343 736 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 PARP10Q53GL7 1025 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 C17orf53Q8N3J3 647 aaPredicted RBP12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.33
PCDHGB4-201ENST00000519479 ZNF532Q9HCE3 1301 aa12.96□□□□□ -0.34
PCDHGB4-201ENST00000519479 KIF20BQ96Q89 1820 aa12.96□□□□□ -0.34
PCDHGB4-201ENST00000519479 CCDC66A2RUB6 948 aa12.96□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.34
PCDHGB4-201ENST00000519479 HEG1Q9ULI3 1381 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 CTSWP56202 376 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 SCRN1Q12765 414 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZMYM1Q5SVZ6 1142 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 GPR108Q9NPR9 543 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 CPDO75976 1380 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 NR1I2O75469 434 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 FGAP02671 866 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 BAG6P46379 1132 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 UBASH3AP57075 661 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZNF274Q96GC6 653 aaPredicted RBP12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 TMEM87BQ96K49 555 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 CCDC194A0A1B0GVG4 234 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 ANO1Q5XXA6 986 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 STK32BQ9NY57 414 aa12.95□□□□□ -0.34
PCDHGB4-201ENST00000519479 AFF2P51816 1311 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 KIF5BP33176 963 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 NAP1L1P55209 391 aaKnown RBP12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 TEX35Q5T0J7 233 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 CEP135Q66GS9 1140 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 TPTE2Q6XPS3 522 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 TTC14Q96N46 770 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZSCAN12O43309 604 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 CYP2E1P05181 493 aaPredicted RBP12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 NOC3LQ8WTT2 800 aaKnown RBP12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 PHKBQ93100 1093 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 USP28Q96RU2 1077 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 TFCP2L1Q9NZI6 479 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 CCDC150Q8NCX0 1101 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 CPLX3Q8WVH0 158 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 GREM2Q9H772 168 aa12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZNHIT6Q9NWK9 470 aaKnown RBP12.94□□□□□ -0.34
PCDHGB4-201ENST00000519479 CIAO1O76071 339 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 SPATA5Q8NB90 893 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 UBXN4Q92575 508 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 H7C1W4 665 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 URI1O94763 535 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 IL25Q9H293 177 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 MAST3O60307 1309 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 AFMP43652 599 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 SNW1Q13573 536 aaKnown RBP12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 ERCC4Q92889 916 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 GNPATO15228 680 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 PDIA3P30101 505 aaKnown RBP12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 DDIT3P35638 169 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 SPTY2D1Q68D10 685 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 GIGYF2Q6Y7W6 1299 aaKnown RBP12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 IFNKQ9P0W0 207 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 SEC63Q9UGP8 760 aaKnown RBP12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 STX8Q9UNK0 236 aa12.93□□□□□ -0.34
PCDHGB4-201ENST00000519479 OVOS2A0A0G2JMS6 1433 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 TRIM75PA6NK02 468 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 BAG3O95817 575 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 CTDSPL2Q05D32 466 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 VPS72Q15906 364 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 PAXBP1Q9Y5B6 917 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 EPS15P42566 896 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 PPP1R1BQ9UD71 204 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
PCDHGB4-201ENST00000519479 SSBP05455 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms