RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 A0A1W2PQD8 194 aa8.59□□□□□ -1.03
PDGFC-203ENST00000502773 FAM177A1Q8N128 213 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-203ENST00000502773 GTPBP4Q9BZE4 634 aaKnown RBP8.59□□□□□ -1.03
PDGFC-203ENST00000502773 TOMM22Q9NS69 142 aa8.59□□□□□ -1.03
PDGFC-203ENST00000502773 RBM28Q9NW13 759 aaKnown RBP8.59□□□□□ -1.03
PDGFC-203ENST00000502773 KCPQ6ZWJ8 1503 aa8.59□□□□□ -1.03
PDGFC-203ENST00000502773 RGPD5Q99666 1765 aa8.59□□□□□ -1.03
PDGFC-203ENST00000502773 KLF18A0A0U1RQI7 1052 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 CBFA2T2O43439 604 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 LIFRP42702 1097 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 TOB2Q14106 344 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 ZNF589Q86UQ0 364 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 LEO1Q8WVC0 666 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 JARID2Q92833 1246 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 SECISBP2LQ93073 1101 aaKnown RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 RCOR1Q9UKL0 485 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 KIF2AO00139 706 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 OLFM4Q6UX06 510 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 PDLIM2Q96JY6 352 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 AFDNP55196 1824 aaKnown RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 CRYBG1Q9Y4K1 1723 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 KDM4AO75164 1064 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 ZAP70P43403 619 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 CCDC102BQ68D86 513 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 RBSNQ9H1K0 784 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 NHSL1Q5SYE7 1610 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 AHDC1Q5TGY3 1603 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 ZNF500O60304 480 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 GNAQP50148 359 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 FAM160A1Q05DH4 1040 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 PKP1Q13835 747 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 FOXD4L6Q3SYB3 417 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 TMEM67Q5HYA8 995 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 FOXD4L3Q6VB84 417 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 GPATCH11Q8N954 259 aa8.58□□□□□ -1.04
PDGFC-203ENST00000502773 CRNKL1Q9BZJ0 848 aaKnown RBP8.58□□□□□ -1.04
PDGFC-203ENST00000502773 ARFGEF2Q9Y6D5 1785 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 GOLGA8AA7E2F4 631 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 IFIT3O14879 490 aaKnown RBP8.57□□□□□ -1.04
PDGFC-203ENST00000502773 CALRP27797 417 aaKnown RBP8.57□□□□□ -1.04
PDGFC-203ENST00000502773 PDIA3P30101 505 aaKnown RBP8.57□□□□□ -1.04
PDGFC-203ENST00000502773 CRKLP46109 303 aaKnown RBP8.57□□□□□ -1.04
PDGFC-203ENST00000502773 ZNF594Q96JF6 807 aaPredicted RBP8.57□□□□□ -1.04
PDGFC-203ENST00000502773 ZBTB1Q9Y2K1 713 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 PDS5AQ29RF7 1337 aaKnown RBP8.57□□□□□ -1.04
PDGFC-203ENST00000502773 PNPLA7Q6ZV29 1317 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 DISP2A7MBM2 1401 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 ZBTB22O15209 634 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 FGAP02671 866 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 GSDMDP57764 484 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 ADALQ6DHV7 355 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 TMC4Q7Z404 712 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 NGLY1Q96IV0 654 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 RTEL1Q9NZ71 1219 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 RAI14Q9P0K7 980 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 STK36Q9NRP7 1315 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 BAG3O95817 575 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 PDE6AP16499 860 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 KIF5BP33176 963 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 PDE4BQ07343 736 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 WTAPQ15007 396 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 SPATA31A5Q5VU36 1347 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 CATIPQ7Z7H3 387 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 SPATA31A7Q8IWB4 1347 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 GREM2Q9H772 168 aa8.57□□□□□ -1.04
PDGFC-203ENST00000502773 CLGNO14967 610 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 PLCG2P16885 1265 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 APOBRQ0VD83 1088 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 SMAP1Q8IYB5 467 aaPredicted RBP8.56□□□□□ -1.04
PDGFC-203ENST00000502773 NSUN7Q8NE18 718 aaKnown RBP8.56□□□□□ -1.04
PDGFC-203ENST00000502773 DDX11Q96FC9 970 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 TIGD1Q96MW7 591 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
PDGFC-203ENST00000502773 CNTNAP4Q9C0A0 1308 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 ADAMTS2O95450 1211 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 SF3B3Q15393 1217 aaKnown RBP8.56□□□□□ -1.04
PDGFC-203ENST00000502773 CT47A1Q5JQC4 288 aaPredicted RBP8.56□□□□□ -1.04
PDGFC-203ENST00000502773 GAS2L3Q86XJ1 694 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 CCAR1Q8IX12 1150 aaKnown RBP8.56□□□□□ -1.04
PDGFC-203ENST00000502773 RNF214Q8ND24 703 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 TRIM5Q9C035 493 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 BSDC1Q9NW68 430 aaPredicted RBP8.56□□□□□ -1.04
PDGFC-203ENST00000502773 MAGEB6P1A0A0J9YX57 407 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 AKNAD1Q5T1N1 836 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 FERMT3Q86UX7 667 aa8.56□□□□□ -1.04
PDGFC-203ENST00000502773 ERICH4A6NGS2 130 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 OFD1O75665 1012 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 TYRO3Q06418 890 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 RILPL1Q5EBL4 403 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 OSBP2Q969R2 916 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 CCDC47Q96A33 483 aaKnown RBP8.55□□□□□ -1.04
PDGFC-203ENST00000502773 PANK2Q9BZ23 570 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 PUS3Q9BZE2 481 aaKnown RBP8.55□□□□□ -1.04
PDGFC-203ENST00000502773 DACT1Q9NYF0 836 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 C5P01031 1676 aa8.55□□□□□ -1.04
PDGFC-203ENST00000502773 SPATA31A6Q5VVP1 1343 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms