RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 TBC1D22AQ8WUA7 517 aa10.12□□□□□ -0.79
SF1-218ENST00000489544 ZNF512BQ96KM6 892 aaPredicted RBP10.12□□□□□ -0.79
SF1-218ENST00000489544 ECHDC1Q9NTX5 307 aa10.12□□□□□ -0.79
SF1-218ENST00000489544 SCAF8Q9UPN6 1271 aaKnown RBP10.12□□□□□ -0.79
SF1-218ENST00000489544 MYO3BQ8WXR4 1341 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 IQCA1LA6NCM1 817 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 GOLIM4O00461 696 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 CHGBP05060 677 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 RBM5P52756 815 aaKnown RBP eCLIP10.11□□□□□ -0.79
SF1-218ENST00000489544 PDE1AP54750 535 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 KIF4BQ2VIQ3 1234 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 NBPF9Q3BBW0 867 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 SLFNL1Q499Z3 407 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 PI4K2BQ8TCG2 481 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 MYOZ2Q9NPC6 264 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 ADARB2Q9NS39 739 aaKnown RBP10.11□□□□□ -0.79
SF1-218ENST00000489544 RAI14Q9P0K7 980 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 AKAP11Q9UKA4 1901 aa10.11□□□□□ -0.79
SF1-218ENST00000489544 PDS5AQ29RF7 1337 aaKnown RBP10.1□□□□□ -0.79
SF1-218ENST00000489544 SALL1Q9NSC2 1324 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 ZBTB22O15209 634 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 IDH1O75874 414 aaKnown RBP10.1□□□□□ -0.79
SF1-218ENST00000489544 LDHBP07195 334 aaKnown RBP10.1□□□□□ -0.79
SF1-218ENST00000489544 CRKP46108 304 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 MECOMQ03112 1051 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 CFAP100Q494V2 611 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 DLK2Q6UY11 383 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 ERICH6Q7L0X2 663 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 CENPQQ7L2Z9 268 aaPredicted RBP10.1□□□□□ -0.79
SF1-218ENST00000489544 PLEKHM2Q8IWE5 1019 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 OGFOD1Q8N543 542 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 PRMT6Q96LA8 375 aaPredicted RBP10.1□□□□□ -0.79
SF1-218ENST00000489544 HAUS7Q99871 368 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 PPP4R2Q9NY27 417 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 LRP2BPQ9P2M1 347 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 HDAC9Q9UKV0 1011 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 CLEC11AQ9Y240 323 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 ADAMTSL1Q8N6G6 1762 aa10.1□□□□□ -0.79
SF1-218ENST00000489544 MYH13Q9UKX3 1938 aa10.09□□□□□ -0.79
SF1-218ENST00000489544 CLRN2A0PK11 232 aa10.09□□□□□ -0.79
SF1-218ENST00000489544 WNT10BO00744 389 aa10.09□□□□□ -0.79
SF1-218ENST00000489544 FMR1Q06787 632 aaKnown RBP eCLIP10.09□□□□□ -0.79
SF1-218ENST00000489544 MAP1SQ66K74 1059 aaPredicted RBP10.09□□□□□ -0.79
SF1-218ENST00000489544 USP50Q70EL3 339 aaPredicted RBP10.09□□□□□ -0.79
SF1-218ENST00000489544 DZIP1Q86YF9 867 aaKnown RBP10.09□□□□□ -0.79
SF1-218ENST00000489544 ZGPATQ8N5A5 531 aaKnown RBP10.09□□□□□ -0.79
SF1-218ENST00000489544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.09□□□□□ -0.79
SF1-218ENST00000489544 GPATCH3Q96I76 525 aa10.09□□□□□ -0.79
SF1-218ENST00000489544 PAG1Q9NWQ8 432 aa10.09□□□□□ -0.79
SF1-218ENST00000489544 STAP2Q9UGK3 403 aa10.09□□□□□ -0.79
SF1-218ENST00000489544 DAGLAQ9Y4D2 1042 aa10.09□□□□□ -0.79
SF1-218ENST00000489544 TTC41PQ6P2S7 1318 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 SCN4AP35499 1836 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 SPDYE2BA6NHP3 402 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 SPDYE6P0CI01 402 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 DLGAP5Q15398 846 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 ERICH6BQ5W0A0 696 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 APOBEC3HQ6NTF7 200 aaKnown RBP10.08□□□□□ -0.8
SF1-218ENST00000489544 ADGRA1Q86SQ6 560 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 TEKT1Q969V4 418 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 NSUN4Q96CB9 384 aaKnown RBP10.08□□□□□ -0.8
SF1-218ENST00000489544 ZBED3Q96IU2 234 aaPredicted RBP10.08□□□□□ -0.8
SF1-218ENST00000489544 TDRD3Q9H7E2 651 aaKnown RBP10.08□□□□□ -0.8
SF1-218ENST00000489544 GGA3Q9NZ52 723 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 SERPINA10Q9UK55 444 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 SUGT1Q9Y2Z0 365 aa10.08□□□□□ -0.8
SF1-218ENST00000489544 MYO5AQ9Y4I1 1855 aaKnown RBP10.07□□□□□ -0.8
SF1-218ENST00000489544 ERC2O15083 957 aa10.07□□□□□ -0.8
SF1-218ENST00000489544 GLRX3O76003 335 aaKnown RBP10.07□□□□□ -0.8
SF1-218ENST00000489544 CACNB3P54284 484 aa10.07□□□□□ -0.8
SF1-218ENST00000489544 ANGEL2Q5VTE6 544 aaKnown RBP10.07□□□□□ -0.8
SF1-218ENST00000489544 SPTY2D1Q68D10 685 aaPredicted RBP10.07□□□□□ -0.8
SF1-218ENST00000489544 PNMA8AQ86V59 439 aaPredicted RBP10.07□□□□□ -0.8
SF1-218ENST00000489544 LDHDQ86WU2 507 aa10.07□□□□□ -0.8
SF1-218ENST00000489544 MAGEB6Q8N7X4 407 aa10.07□□□□□ -0.8
SF1-218ENST00000489544 ADM5C9JUS6 153 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 TRAF5O00463 557 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 CYP7A1P22680 504 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 RGS3P49796 1198 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 DYNLL1P63167 89 aaKnown RBP10.06□□□□□ -0.8
SF1-218ENST00000489544 HDLBPQ00341 1268 aaKnown RBP10.06□□□□□ -0.8
SF1-218ENST00000489544 SLC9C2Q5TAH2 1124 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 PRAMEF18Q5VWM3 479 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 NAA16Q6N069 864 aaPredicted RBP10.06□□□□□ -0.8
SF1-218ENST00000489544 HHIPL2Q6UWX4 724 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 USP48Q86UV5 1035 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 MIGA1Q8NAN2 632 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 MTMR14Q8NCE2 650 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 ZDHHC15Q96MV8 337 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 GLIS2Q9BZE0 524 aaPredicted RBP10.06□□□□□ -0.8
SF1-218ENST00000489544 VEZTQ9HBM0 779 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 MROH7-TTC4A0A0A0MT08 1334 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 GAKO14976 1311 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 MAST3O60307 1309 aa10.06□□□□□ -0.8
SF1-218ENST00000489544 TOMM70O94826 608 aa10.05□□□□□ -0.8
SF1-218ENST00000489544 GSPT1P15170 499 aaKnown RBP10.05□□□□□ -0.8
SF1-218ENST00000489544 PDE6AP16499 860 aa10.05□□□□□ -0.8
SF1-218ENST00000489544 BTDP43251 543 aa10.05□□□□□ -0.8
SF1-218ENST00000489544 MAP3K12Q12852 859 aa10.05□□□□□ -0.8
SF1-218ENST00000489544 TTF1Q15361 905 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms