RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 SCRN1Q12765 414 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 STOX1Q6ZVD7 989 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 DNAJC10Q8IXB1 793 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 HAUS7Q99871 368 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 DNAI1Q9UI46 699 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 PAPPAQ13219 1627 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 A0A0G2JLW4 131 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 H7C1W4 665 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 GOLIM4O00461 696 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 TIMM10P62072 90 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 TMC6Q7Z403 805 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 ENGASEQ8NFI3 743 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 RSPH14Q9UHP6 348 aa16.44■□□□□ 0.22
RER1-207ENST00000488353 TADA3O75528 432 aa16.43■□□□□ 0.22
RER1-207ENST00000488353 OAS2P29728 719 aaKnown RBP16.43■□□□□ 0.22
RER1-207ENST00000488353 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
RER1-207ENST00000488353 CCT2P78371 535 aaKnown RBP16.43■□□□□ 0.22
RER1-207ENST00000488353 APOBRQ0VD83 1088 aa16.43■□□□□ 0.22
RER1-207ENST00000488353 SMC1AQ14683 1233 aaKnown RBP16.43■□□□□ 0.22
RER1-207ENST00000488353 FTOQ9C0B1 505 aaKnown RBP eCLIP16.43■□□□□ 0.228e-16■□□□□ 9.3
RER1-207ENST00000488353 XPO4Q9C0E2 1151 aaKnown RBP16.43■□□□□ 0.22
RER1-207ENST00000488353 MYO1CO00159 1063 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 SMC2O95347 1197 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 LRRFIP1Q32MZ4 808 aaKnown RBP16.42■□□□□ 0.22
RER1-207ENST00000488353 ATL3Q6DD88 541 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 AK7Q96M32 723 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 ATG3Q9NT62 314 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 LAMA4Q16363 1823 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 A0A087WWV3 80 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 CHST3Q7LGC8 479 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 IFNKQ9P0W0 207 aa16.42■□□□□ 0.22
RER1-207ENST00000488353 SEC31AO94979 1220 aaKnown RBP16.41■□□□□ 0.22
RER1-207ENST00000488353 ZRSR1Q15695 479 aaKnown RBP16.41■□□□□ 0.22
RER1-207ENST00000488353 KBTBD3Q8NAB2 608 aa16.41■□□□□ 0.22
RER1-207ENST00000488353 GOLGA5Q8TBA6 731 aa16.41■□□□□ 0.22
RER1-207ENST00000488353 ZNF594Q96JF6 807 aaPredicted RBP16.41■□□□□ 0.22
RER1-207ENST00000488353 NCOA5Q9HCD5 579 aaKnown RBP16.41■□□□□ 0.22
RER1-207ENST00000488353 ZCCHC17Q9NP64 241 aaKnown RBP16.41■□□□□ 0.22
RER1-207ENST00000488353 PSD3Q9NYI0 1048 aa16.41■□□□□ 0.22
RER1-207ENST00000488353 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
RER1-207ENST00000488353 URI1O94763 535 aaPredicted RBP16.41■□□□□ 0.22
RER1-207ENST00000488353 GUCY1B3Q02153 619 aa16.41■□□□□ 0.22
RER1-207ENST00000488353 CC2D1AQ6P1N0 951 aaPredicted RBP16.41■□□□□ 0.22
RER1-207ENST00000488353 CTR9Q6PD62 1173 aa16.41■□□□□ 0.22
RER1-207ENST00000488353 ROBO1Q9Y6N7 1651 aa16.41■□□□□ 0.22
RER1-207ENST00000488353 SASH3O75995 380 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 NAA16Q6N069 864 aaPredicted RBP16.4■□□□□ 0.22
RER1-207ENST00000488353 TRIM65Q6PJ69 517 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 GPR161Q8N6U8 529 aaKnown RBP16.4■□□□□ 0.22
RER1-207ENST00000488353 FSIP1Q8NA03 581 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 EXOC4Q96A65 974 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 ZNF396Q96N95 335 aaPredicted RBP16.4■□□□□ 0.22
RER1-207ENST00000488353 SDF4Q9BRK5 362 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 CARD6Q9BX69 1037 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 PAG1Q9NWQ8 432 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 EVCP57679 992 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 C10orf67Q8IYJ2 551 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 FBXO18Q8NFZ0 1043 aa16.4■□□□□ 0.22
RER1-207ENST00000488353 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
RER1-207ENST00000488353 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 CTDNEP1O95476 244 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 CASQ1P31415 396 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 DHX32Q7L7V1 743 aaKnown RBP16.39■□□□□ 0.21
RER1-207ENST00000488353 ATG9AQ7Z3C6 839 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 NSUN7Q8NE18 718 aaKnown RBP16.39■□□□□ 0.21
RER1-207ENST00000488353 LLPHQ9BRT6 129 aaKnown RBP16.39■□□□□ 0.21
RER1-207ENST00000488353 ARFGAP3Q9NP61 516 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 MYH15Q9Y2K3 1946 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 TJP1Q07157 1748 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 PFKFB2O60825 505 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 ME1P48163 572 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 LRRC24Q50LG9 513 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 FBXW7Q969H0 707 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 USP28Q96RU2 1077 aa16.39■□□□□ 0.21
RER1-207ENST00000488353 A0A0G2JS52 829 aa16.38■□□□□ 0.21
RER1-207ENST00000488353 PTPDC1A2A3K4 754 aa16.38■□□□□ 0.21
RER1-207ENST00000488353 NOP2P46087 812 aaKnown RBP16.38■□□□□ 0.21
RER1-207ENST00000488353 REXO1L1PQ8IX06 675 aa16.38■□□□□ 0.21
RER1-207ENST00000488353 SMARCC2Q8TAQ2 1214 aa16.38■□□□□ 0.21
RER1-207ENST00000488353 SLC4A9Q96Q91 983 aa16.38■□□□□ 0.21
RER1-207ENST00000488353 PARP3Q9Y6F1 533 aa16.38■□□□□ 0.21
RER1-207ENST00000488353 ERCC4Q92889 916 aaPredicted RBP16.38■□□□□ 0.21
RER1-207ENST00000488353 YY1AP1Q9H869 796 aa16.38■□□□□ 0.21
RER1-207ENST00000488353 KIAA1468Q9P260 1216 aa16.38■□□□□ 0.21
RER1-207ENST00000488353 DISP2A7MBM2 1401 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 TRIM66O15016 1216 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 TTLL5Q6EMB2 1281 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 SRLQ86TD4 932 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
RER1-207ENST00000488353 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 PUS3Q9BZE2 481 aaKnown RBP16.37■□□□□ 0.21
RER1-207ENST00000488353 ADAM21Q9UKJ8 722 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 E7EWF7 191 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 EXOC5O00471 708 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms