RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 BCAR3O75815 825 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 MCM5P33992 734 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 ARPP21Q9UBL0 812 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-205ENST00000465950 ZNF215Q9UL58 517 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-205ENST00000465950 NCAPD2Q15021 1401 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 DCDC2CA8MYV0 355 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 IARSP41252 1262 aaKnown RBP10.85□□□□□ -0.67
SCAF11-205ENST00000465950 CTSWP56202 376 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 KIF4BQ2VIQ3 1234 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 SLC17A8Q8NDX2 589 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 NKX2-3Q8TAU0 364 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 SBNO2Q9Y2G9 1366 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 ZNF804BA4D1E1 1349 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 C21orf2O43822 256 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 METP08581 1390 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 MLXIPQ9HAP2 919 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 GINM1Q9NU53 330 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 KCNJ6P48051 423 aa10.85□□□□□ -0.67
SCAF11-205ENST00000465950 PTPDC1A2A3K4 754 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 CARNS1A5YM72 827 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 SLC1A4P43007 532 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 SMTNP53814 917 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 FCGRTP55899 365 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
SCAF11-205ENST00000465950 EXOC7Q9UPT5 735 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 CDK12Q9NYV4 1490 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-205ENST00000465950 PHACTR2O75167 634 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 GIGYF2Q6Y7W6 1299 aaKnown RBP10.84□□□□□ -0.67
SCAF11-205ENST00000465950 PDRG1Q9NUG6 133 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 DIP2AQ14689 1571 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 PCP11498 1178 aaKnown RBP10.84□□□□□ -0.67
SCAF11-205ENST00000465950 CETPP11597 493 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 ABCD1P33897 745 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 NAPAP54920 295 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 GCNAQ96QF7 691 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 CEP170BQ9Y4F5 1589 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-205ENST00000465950 SOCS7O14512 581 aa10.84□□□□□ -0.67
SCAF11-205ENST00000465950 TAF1CQ15572 869 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-205ENST00000465950 ZRSR2Q15696 482 aaKnown RBP10.84□□□□□ -0.67
SCAF11-205ENST00000465950 FOXP4Q8IVH2 680 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-205ENST00000465950 SH2B1Q9NRF2 756 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-205ENST00000465950 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-205ENST00000465950 KRT13P13646 458 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 INHBEP58166 350 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 HOXC10Q9NYD6 342 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 PHLPP2Q6ZVD8 1323 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 HUNKP57058 714 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 ZMYND15Q9H091 742 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 ADCY10Q96PN6 1610 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 BCAMP50895 628 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 SNAPC2Q13487 334 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 CRAMP1Q96RY5 1269 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 OTUD6AQ7L8S5 288 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 HELBQ8NG08 1087 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-205ENST00000465950 FAM89AQ96GI7 184 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 CCDC8Q9H0W5 538 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-205ENST00000465950 IL1RAPL2Q9NP60 686 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 SUGT1Q9Y2Z0 365 aa10.83□□□□□ -0.68
SCAF11-205ENST00000465950 TNPO2O14787 897 aaKnown RBP10.82□□□□□ -0.68
SCAF11-205ENST00000465950 SP8Q8IXZ3 490 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 THUMPD2Q9BTF0 503 aaKnown RBP10.82□□□□□ -0.68
SCAF11-205ENST00000465950 WDR70Q9NW82 654 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 TCP10L2B9ZVM9 353 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 ERLIN2O94905 339 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 A1BGP04217 495 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 NSMFQ6X4W1 530 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 FAM160B2Q86V87 743 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 PPP2R3BQ9Y5P8 575 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 ROBO2Q9HCK4 1378 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 RPLP2P05387 115 aaKnown RBP10.82□□□□□ -0.68
SCAF11-205ENST00000465950 RUFY4Q6ZNE9 571 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 NUDT18Q6ZVK8 323 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 KIAA0825Q8IV33 1275 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 IPO9Q96P70 1041 aaKnown RBP10.82□□□□□ -0.68
SCAF11-205ENST00000465950 NRBP2Q9NSY0 501 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 TTC41PQ6P2S7 1318 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 NPC1L1Q9UHC9 1359 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 ASNSP08243 561 aa10.82□□□□□ -0.68
SCAF11-205ENST00000465950 RNF113AO15541 343 aaKnown RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 ATF7P17544 494 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 LIG1P18858 919 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 E2F5Q15329 346 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 CCDC181Q5TID7 509 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 PDILTQ8N807 584 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 SOS2Q07890 1332 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 EZH2Q15910 746 aaKnown RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 CERKLQ49MI3 558 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 C9orf131Q5VYM1 1079 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 ADPGKQ9BRR6 497 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 IBTKQ9P2D0 1353 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 ZSCAN20P17040 1043 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 HS1BP3Q53T59 392 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 FAM114A1Q8IWE2 563 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 ZNF496Q96IT1 587 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 MANSC4A6NHS7 340 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 KANK3Q6NY19 840 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 MAGEB6Q8N7X4 407 aa10.81□□□□□ -0.68
SCAF11-205ENST00000465950 ADARB2Q9NS39 739 aaKnown RBP10.81□□□□□ -0.68
SCAF11-205ENST00000465950 UBA7P41226 1012 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms