RNA–Protein interactions for RNA: ENST00000443213.5

SRSF7-208, Transcript of serine and arginine rich splicing factor 7, human

TSL 5

Gene SRSF7, Length 1,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF7-208	ENST00000443213	GRIN3B	O60391	1043 aa		12.85	□□□□□ -0.35
SRSF7-208	ENST00000443213	IDH1	O75874	414 aa	Known RBP	12.85	□□□□□ -0.35
SRSF7-208	ENST00000443213	TTF1	Q15361	905 aa	Predicted RBP	12.85	□□□□□ -0.35
SRSF7-208	ENST00000443213	KBTBD3	Q8NAB2	608 aa		12.85	□□□□□ -0.35
SRSF7-208	ENST00000443213	WDR66	Q8TBY9	1149 aa		12.85	□□□□□ -0.35
SRSF7-208	ENST00000443213	LRP2BP	Q9P2M1	347 aa		12.85	□□□□□ -0.35
SRSF7-208	ENST00000443213	PDS5A	Q29RF7	1337 aa	Known RBP	12.85	□□□□□ -0.35
SRSF7-208	ENST00000443213	USP17L3	A6NCW0	530 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	USP17L4	A6NCW7	530 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	RAD17	O75943	681 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	CHGB	P05060	677 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	MFSD14B	Q5SR56	506 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	ASTL	Q6HA08	431 aa	Predicted RBP	12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	USP17L1	Q7RTZ2	530 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	KIF12	Q96FN5	646 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	MXD3	Q9BW11	206 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	FAM205A	Q6ZU69	1335 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	PRDX5	P30044	214 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	GRIK5	Q16478	980 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	STRIP1	Q5VSL9	837 aa		12.84	□□□□□ -0.35
SRSF7-208	ENST00000443213	SALL1	Q9NSC2	1324 aa		12.83	□□□□□ -0.36
SRSF7-208	ENST00000443213	SLFNL1	Q499Z3	407 aa		12.83	□□□□□ -0.36
SRSF7-208	ENST00000443213	DACT2	Q5SW24	774 aa		12.83	□□□□□ -0.36
SRSF7-208	ENST00000443213	CERS5	Q8N5B7	392 aa		12.83	□□□□□ -0.36
SRSF7-208	ENST00000443213	TBC1D22A	Q8WUA7	517 aa		12.83	□□□□□ -0.36
SRSF7-208	ENST00000443213	RAI14	Q9P0K7	980 aa		12.83	□□□□□ -0.36
SRSF7-208	ENST00000443213	CXCL9	Q07325	125 aa		12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	MAP3K12	Q12852	859 aa		12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	SLC9C2	Q5TAH2	1124 aa		12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	ZGPAT	Q8N5A5	531 aa	Known RBP	12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	RNF181	Q9P0P0	153 aa		12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	PSME4	Q14997	1843 aa		12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	FZD9	O00144	591 aa		12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	PSMD14	O00487	310 aa		12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	LDHB	P07195	334 aa	Known RBP	12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	C9orf131	Q5VYM1	1079 aa		12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	ERICH6	Q7L0X2	663 aa		12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
SRSF7-208	ENST00000443213	VIL1	P09327	827 aa	Known RBP	12.81	□□□□□ -0.36
SRSF7-208	ENST00000443213	CHML	P26374	656 aa		12.81	□□□□□ -0.36
SRSF7-208	ENST00000443213	MECOM	Q03112	1051 aa		12.81	□□□□□ -0.36
SRSF7-208	ENST00000443213	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.81	□□□□□ -0.36
SRSF7-208	ENST00000443213	MAGEB6	Q8N7X4	407 aa		12.81	□□□□□ -0.36
SRSF7-208	ENST00000443213		F8W031	263 aa	Predicted RBP	12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	RNF113A	O15541	343 aa	Known RBP	12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	ATMIN	O43313	823 aa	Predicted RBP	12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	CDC45	O75419	566 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	PDE6A	P16499	860 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	CIAPIN1	Q6FI81	312 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	CWC27	Q6UX04	472 aa	Known RBP	12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	DZIP1	Q86YF9	867 aa	Known RBP	12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	ZNF384	Q8TF68	577 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	NSUN4	Q96CB9	384 aa	Known RBP	12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	FAM227B	Q96M60	508 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	DIAPH3	Q9NSV4	1193 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	TIAM2	Q8IVF5	1701 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	ADD2	P35612	726 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	EIF6	P56537	245 aa	Known RBP	12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	ZSCAN25	Q6NSZ9	544 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	KIAA0825	Q8IV33	1275 aa		12.8	□□□□□ -0.36
SRSF7-208	ENST00000443213	ZNF532	Q9HCE3	1301 aa		12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	ZFY	P08048	801 aa	Predicted RBP	12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	FKBP1A	P62942	108 aa	Known RBP	12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	NMI	Q13287	307 aa	Predicted RBP	12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	TNIP1	Q15025	636 aa		12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	C8orf34	Q49A92	452 aa		12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	NAA16	Q6N069	864 aa	Predicted RBP	12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	CASC1	Q6TDU7	716 aa		12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	TTF2	Q9UNY4	1162 aa	Known RBP	12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	SUGT1	Q9Y2Z0	365 aa		12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	ZNF541	Q9H0D2	1346 aa		12.79	□□□□□ -0.36
SRSF7-208	ENST00000443213	TCRBV5S4A2T	A0A5A2	114 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	HIP1	O00291	1037 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	CYP7A1	P22680	504 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	UBE3C	Q15386	1083 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	DIXDC1	Q155Q3	683 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	ADGRA1	Q86SQ6	560 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	SEC62	Q99442	399 aa	Known RBP	12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	GJA3	Q9Y6H8	435 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213		A0A0D9SFI3	127 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	SCNN1D	P51172	638 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	NUBP1	P53384	320 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	TICAM2	Q86XR7	235 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	OSBP2	Q969R2	916 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	GML	Q99445	158 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	PUS7L	Q9H0K6	701 aa	Known RBP	12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	IL25	Q9H293	177 aa		12.78	□□□□□ -0.36
SRSF7-208	ENST00000443213	RFX7	Q2KHR2	1363 aa		12.77	□□□□□ -0.36
SRSF7-208	ENST00000443213	AK9	Q5TCS8	1911 aa		12.77	□□□□□ -0.37
SRSF7-208	ENST00000443213	POTEB2	H3BUK9	544 aa		12.77	□□□□□ -0.37
SRSF7-208	ENST00000443213	ZMYM1	Q5SVZ6	1142 aa		12.77	□□□□□ -0.37
SRSF7-208	ENST00000443213	MIGA1	Q8NAN2	632 aa		12.77	□□□□□ -0.37
SRSF7-208	ENST00000443213	APPBP2	Q92624	585 aa		12.77	□□□□□ -0.37
SRSF7-208	ENST00000443213	MYO3B	Q8WXR4	1341 aa		12.77	□□□□□ -0.37
SRSF7-208	ENST00000443213	AGBL3	Q8NEM8	1001 aa		12.76	□□□□□ -0.37
SRSF7-208	ENST00000443213	ADAMTSL1	Q8N6G6	1762 aa		12.76	□□□□□ -0.37
SRSF7-208	ENST00000443213		M0R2C6	588 aa		12.76	□□□□□ -0.37
SRSF7-208	ENST00000443213	IGSF3	O75054	1194 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms