RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 HYAL2Q12891 473 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 RASGRF1Q13972 1273 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 HOMER1Q86YM7 354 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 ZFP42Q96MM3 310 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 PNMA5Q96PV4 448 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 MIR1-1HGQ9H1L0 117 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 SCARF1Q14162 830 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 MPP2Q14168 576 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 CWF19L2Q2TBE0 894 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 PLEKHG6Q3KR16 790 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 TKFCQ3LXA3 575 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 EFHC2Q5JST6 749 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 GK5Q6ZS86 529 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 RAB44Q7Z6P3 723 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 NXPE3Q969Y0 559 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 ZNF775Q96BV0 537 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 CRBNQ96SW2 442 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 BRMS1Q9HCU9 246 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 ZNRF3Q9ULT6 936 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 PPME1Q9Y570 386 aa5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-207ENST00000441725 SOS2Q07890 1332 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 ARID4BQ4LE39 1312 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 KHNYNO15037 678 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 ATXN7O15265 892 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 PLAURQ03405 335 aa5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 CLCQ05315 142 aa5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 ARSHQ5FYA8 562 aa5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 LARP1BQ659C4 914 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 REC114Q7Z4M0 266 aa5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 TMEM102Q8N9M5 508 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 IRF2BPLQ9H1B7 796 aa5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 DDX56Q9NY93 547 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 LMNB1P20700 586 aa5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 ZNF165P49910 485 aa5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 DHX32Q7L7V1 743 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 CCDC84Q86UT8 332 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 LSRQ86X29 649 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 MUC3BQ9H195 1237 aa5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 TMEM39AQ9NV64 488 aa5.66□□□□□ -1.5
CDC42BPA-207ENST00000441725 SENP3-EIF4A1A0A087X0R7 540 aa5.65□□□□□ -1.5
CDC42BPA-207ENST00000441725 CILPO75339 1184 aa5.65□□□□□ -1.5
CDC42BPA-207ENST00000441725 GJB6O95452 261 aa5.65□□□□□ -1.5
CDC42BPA-207ENST00000441725 HOXD8P13378 290 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-207ENST00000441725 BMP6P22004 513 aa5.65□□□□□ -1.5
CDC42BPA-207ENST00000441725 SPEM2Q0P670 501 aa5.65□□□□□ -1.5
CDC42BPA-207ENST00000441725 C16orf86Q6ZW13 317 aa5.65□□□□□ -1.5
CDC42BPA-207ENST00000441725 BHMTQ93088 406 aa5.65□□□□□ -1.5
CDC42BPA-207ENST00000441725 FEZ1Q99689 392 aa5.65□□□□□ -1.5
CDC42BPA-207ENST00000441725 PDE2AO00408 941 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 MAPTP10636 758 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 ATP11AP98196 1134 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 TNP2Q05952 138 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 UBAP2LQ14157 1087 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 PPP2R5EQ16537 467 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 FXNQ16595 210 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 MTERF2Q49AM1 385 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 C2orf27AQ580R0 203 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 RPS26P11Q5JNZ5 115 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 SPATC1Q76KD6 591 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 REXO1Q8N1G1 1221 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 SLC30A3Q99726 388 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 RASSF4Q9H2L5 321 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 SUGT1Q9Y2Z0 365 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 PCDHGC4Q9Y5F7 938 aa5.65□□□□□ -1.51
CDC42BPA-207ENST00000441725 DIAPH1O60610 1272 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 MAP3K6O95382 1288 aa5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 MASP1P48740 699 aa5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 FIGNL1Q6PIW4 674 aa5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 RUFY4Q6ZNE9 571 aa5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 OR6P1Q8NGX9 317 aa5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 STK35Q8TDR2 534 aa5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 CHPF2Q9P2E5 772 aa5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 PFDN2Q9UHV9 154 aa5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 DNMT3LQ9UJW3 386 aa5.64□□□□□ -1.51
CDC42BPA-207ENST00000441725 B2RBV5 119 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 J3QW42 95 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 HFE2Q6ZVN8 426 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 GRIN3AQ8TCU5 1115 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 GAL3ST3Q96A11 431 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 G3BP2Q9UN86 482 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 HCLS1P14317 486 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 CASP7P55210 303 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 MLLT1Q03111 559 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 JMYQ8N9B5 988 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 RBBP8NLQ8NC74 664 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 THAP3Q8WTV1 239 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 PBX4Q9BYU1 374 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 CLEC4MQ9H2X3 399 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 SLC52A1Q9NWF4 448 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 MARK1Q9P0L2 795 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 CYP8B1Q9UNU6 501 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 PCDHB14Q9Y5E9 798 aa5.63□□□□□ -1.51
CDC42BPA-207ENST00000441725 KDM2BQ8NHM5 1336 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 ZBTB42B2RXF5 422 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 BNIP3LO60238 219 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 DDAH1O94760 285 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 NRLP54845 237 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 PTPN11Q06124 597 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 LBRQ14739 615 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms