RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CAPNS2Q96L46 248 aa32.58■■■□□ 2.81
CDK9-202ENST00000421939 ECE1P42892 770 aa32.57■■■□□ 2.8
CDK9-202ENST00000421939 GPR108Q9NPR9 543 aa32.57■■■□□ 2.8
CDK9-202ENST00000421939 WDR33Q9C0J8 1336 aaKnown RBP32.56■■■□□ 2.8
CDK9-202ENST00000421939 PAPPA2Q9BXP8 1791 aa32.56■■■□□ 2.8
CDK9-202ENST00000421939 HUNKP57058 714 aa32.56■■■□□ 2.8
CDK9-202ENST00000421939 RASGRF1Q13972 1273 aa32.56■■■□□ 2.8
CDK9-202ENST00000421939 PRAMEF18Q5VWM3 479 aa32.56■■■□□ 2.8
CDK9-202ENST00000421939 CYP4F22Q6NT55 531 aa32.56■■■□□ 2.8
CDK9-202ENST00000421939 TEKT1Q969V4 418 aa32.56■■■□□ 2.8
CDK9-202ENST00000421939 THSD7BQ9C0I4 1608 aa32.55■■■□□ 2.8
CDK9-202ENST00000421939 SALL1Q9NSC2 1324 aa32.55■■■□□ 2.8
CDK9-202ENST00000421939 GORABQ5T7V8 394 aa32.55■■■□□ 2.8
CDK9-202ENST00000421939 VEZTQ9HBM0 779 aa32.55■■■□□ 2.8
CDK9-202ENST00000421939 PDS5AQ29RF7 1337 aaKnown RBP32.54■■■□□ 2.8
CDK9-202ENST00000421939 SPDYE2Q495Y8 402 aa32.54■■■□□ 2.8
CDK9-202ENST00000421939 TNNI3KQ59H18 835 aa32.54■■■□□ 2.8
CDK9-202ENST00000421939 DEFB129Q9H1M3 183 aa32.54■■■□□ 2.8
CDK9-202ENST00000421939 FPGT-TNNI3KV9GXZ4 949 aa32.54■■■□□ 2.8
CDK9-202ENST00000421939 GRM1Q13255 1194 aa32.53■■■□□ 2.8
CDK9-202ENST00000421939 RPAP2Q8IXW5 612 aaPredicted RBP32.53■■■□□ 2.8
CDK9-202ENST00000421939 PRDX5P30044 214 aa32.52■■■□□ 2.8
CDK9-202ENST00000421939 FKBP1BP68106 108 aa32.52■■■□□ 2.8
CDK9-202ENST00000421939 MRIQ9BWK5 157 aa32.52■■■□□ 2.8
CDK9-202ENST00000421939 TDRD3Q9H7E2 651 aaKnown RBP32.52■■■□□ 2.8
CDK9-202ENST00000421939 ZNF70Q9UC06 446 aaPredicted RBP32.52■■■□□ 2.8
CDK9-202ENST00000421939 EXOC6BQ9Y2D4 811 aa32.52■■■□□ 2.8
CDK9-202ENST00000421939 PPP2R3BQ9Y5P8 575 aa32.52■■■□□ 2.8
CDK9-202ENST00000421939 HMMRO75330 724 aa32.51■■■□□ 2.79
CDK9-202ENST00000421939 NF2P35240 595 aa32.51■■■□□ 2.79
CDK9-202ENST00000421939 ZGPATQ8N5A5 531 aaKnown RBP32.51■■■□□ 2.79
CDK9-202ENST00000421939 ZDHHC15Q96MV8 337 aa32.51■■■□□ 2.79
CDK9-202ENST00000421939 LDHBP07195 334 aaKnown RBP32.5■■■□□ 2.79
CDK9-202ENST00000421939 HSPA1AP0DMV8 641 aaKnown RBP32.49■■■□□ 2.79
CDK9-202ENST00000421939 HSPA1BP0DMV9 641 aaKnown RBP32.49■■■□□ 2.79
CDK9-202ENST00000421939 ARID4AP29374 1257 aaPredicted RBP32.49■■■□□ 2.79
CDK9-202ENST00000421939 TNFAIP1Q13829 316 aa32.49■■■□□ 2.79
CDK9-202ENST00000421939 HHIPL2Q6UWX4 724 aa32.49■■■□□ 2.79
CDK9-202ENST00000421939 ERC1Q8IUD2 1116 aa32.49■■■□□ 2.79
CDK9-202ENST00000421939 SIRT2Q8IXJ6 389 aa32.49■■■□□ 2.79
CDK9-202ENST00000421939 RRP1P56182 461 aaKnown RBP32.48■■■□□ 2.79
CDK9-202ENST00000421939 HSP90AB4PQ58FF6 505 aa32.48■■■□□ 2.79
CDK9-202ENST00000421939 DBNDD2Q9BQY9 259 aa32.48■■■□□ 2.79
CDK9-202ENST00000421939 RGMBQ6NW40 437 aa32.47■■■□□ 2.79
CDK9-202ENST00000421939 UQCRFS1P1P0C7P4 283 aa32.46■■■□□ 2.79
CDK9-202ENST00000421939 RASA3Q14644 834 aa32.46■■■□□ 2.79
CDK9-202ENST00000421939 APOBEC3HQ6NTF7 200 aaKnown RBP32.46■■■□□ 2.79
CDK9-202ENST00000421939 HMG20BQ9P0W2 317 aa32.46■■■□□ 2.79
CDK9-202ENST00000421939 TTLL12Q14166 644 aaPredicted RBP32.45■■■□□ 2.79
CDK9-202ENST00000421939 DIXDC1Q155Q3 683 aa32.45■■■□□ 2.79
CDK9-202ENST00000421939 SPATA5Q8NB90 893 aa32.45■■■□□ 2.79
CDK9-202ENST00000421939 ABCF2Q9UG63 623 aa32.45■■■□□ 2.79
CDK9-202ENST00000421939 SSC5DA1L4H1 1573 aa32.45■■■□□ 2.78
CDK9-202ENST00000421939 AOC2O75106 756 aa32.44■■■□□ 2.78
CDK9-202ENST00000421939 PI16Q6UXB8 463 aa32.44■■■□□ 2.78
CDK9-202ENST00000421939 MOB2Q70IA6 237 aa32.44■■■□□ 2.78
CDK9-202ENST00000421939 DBNLQ9UJU6 430 aaKnown RBP32.44■■■□□ 2.78
CDK9-202ENST00000421939 DAGLAQ9Y4D2 1042 aa32.44■■■□□ 2.78
CDK9-202ENST00000421939 MCAMP43121 646 aa32.43■■■□□ 2.78
CDK9-202ENST00000421939 CCDC158Q5M9N0 1113 aa32.43■■■□□ 2.78
CDK9-202ENST00000421939 TTC39AQ5SRH9 613 aa32.43■■■□□ 2.78
CDK9-202ENST00000421939 SPTY2D1Q68D10 685 aaPredicted RBP32.43■■■□□ 2.78
CDK9-202ENST00000421939 DZIP1Q86YF9 867 aaKnown RBP32.43■■■□□ 2.78
CDK9-202ENST00000421939 EAF2Q96CJ1 260 aaPredicted RBP32.43■■■□□ 2.78
CDK9-202ENST00000421939 TMOD2Q9NZR1 351 aa32.43■■■□□ 2.78
CDK9-202ENST00000421939 TCP10L2B9ZVM9 353 aa32.42■■■□□ 2.78
CDK9-202ENST00000421939 MAP2K2P36507 400 aa32.42■■■□□ 2.78
CDK9-202ENST00000421939 ZNF157P51786 506 aaPredicted RBP32.42■■■□□ 2.78
CDK9-202ENST00000421939 TLR7Q9NYK1 1049 aaKnown RBP32.42■■■□□ 2.78
CDK9-202ENST00000421939 UBE2Q2LH0YL09 131 aa32.41■■■□□ 2.78
CDK9-202ENST00000421939 TNNI2P48788 182 aa32.41■■■□□ 2.78
CDK9-202ENST00000421939 MAP2K1Q02750 393 aaPredicted RBP32.41■■■□□ 2.78
CDK9-202ENST00000421939 NOGQ13253 232 aa32.41■■■□□ 2.78
CDK9-202ENST00000421939 SUPT20HL1Q3ZLR7 823 aa32.41■■■□□ 2.78
CDK9-202ENST00000421939 CCDC102AQ96A19 550 aa32.41■■■□□ 2.78
CDK9-202ENST00000421939 CCDC8Q9H0W5 538 aaPredicted RBP32.41■■■□□ 2.78
CDK9-202ENST00000421939 CACNB3P54284 484 aa32.4■■■□□ 2.78
CDK9-202ENST00000421939 ARMC9Q7Z3E5 817 aa32.4■■■□□ 2.78
CDK9-202ENST00000421939 RHPN1Q8TCX5 695 aa32.4■■■□□ 2.78
CDK9-202ENST00000421939 WBP1LQ9NX94 342 aa32.4■■■□□ 2.78
CDK9-202ENST00000421939 FAM155AB1AL88 458 aaPredicted RBP32.39■■■□□ 2.78
CDK9-202ENST00000421939 PRKG1Q13976 671 aa32.39■■■□□ 2.78
CDK9-202ENST00000421939 NBPF12Q5TAG4 269 aaPredicted RBP32.39■■■□□ 2.78
CDK9-202ENST00000421939 ERICH6Q7L0X2 663 aa32.39■■■□□ 2.78
CDK9-202ENST00000421939 AACSQ86V21 672 aa32.39■■■□□ 2.78
CDK9-202ENST00000421939 AIDAQ96BJ3 306 aa32.39■■■□□ 2.78
CDK9-202ENST00000421939 KIF1BPQ96EK5 621 aa32.39■■■□□ 2.78
CDK9-202ENST00000421939 ZNF512BQ96KM6 892 aaPredicted RBP32.39■■■□□ 2.78
CDK9-202ENST00000421939 MYH2Q9UKX2 1941 aa32.38■■■□□ 2.77
CDK9-202ENST00000421939 GAKO14976 1311 aa32.38■■■□□ 2.77
CDK9-202ENST00000421939 SLC10A3P09131 477 aa32.38■■■□□ 2.77
CDK9-202ENST00000421939 FKBP1CQ5VVH2 108 aa32.38■■■□□ 2.77
CDK9-202ENST00000421939 IL1RAPL2Q9NP60 686 aa32.38■■■□□ 2.77
CDK9-202ENST00000421939 APBB1O00213 710 aa32.37■■■□□ 2.77
CDK9-202ENST00000421939 PPP1R12BO60237 982 aaPredicted RBP32.37■■■□□ 2.77
CDK9-202ENST00000421939 RASAL3Q86YV0 1011 aa32.37■■■□□ 2.77
CDK9-202ENST00000421939 SLF2Q8IX21 1173 aa32.37■■■□□ 2.77
CDK9-202ENST00000421939 TEPSINQ96N21 525 aa32.37■■■□□ 2.77
CDK9-202ENST00000421939 TMEM39BQ9GZU3 492 aa32.37■■■□□ 2.77
CDK9-202ENST00000421939 ANGEL1Q9UNK9 670 aaKnown RBP32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms