RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 ALG1Q9BT22 464 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 TMEM232C9JQI7 657 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 CAVIN2O95810 425 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 ATF3P18847 181 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 SLC9C2Q5TAH2 1124 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 CYB5R4Q7L1T6 521 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 PPP1R13BQ96KQ4 1090 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 ZKSCAN3Q9BRR0 538 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 TOMM22Q9NS69 142 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 A0A0G2JS52 829 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 SERPINC1P01008 464 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 KIF23Q02241 960 aaPredicted RBP12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 CFAP100Q494V2 611 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 TBC1D10CQ8IV04 446 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 CGNQ9P2M7 1197 aaKnown RBP12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 OVOS2A0A0G2JMS6 1433 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 ERICH4A6NGS2 130 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 CDC27P30260 824 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 ZNF827Q17R98 1081 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 METTL24Q5JXM2 366 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 NFXL1Q6ZNB6 911 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 VPS37DQ86XT2 251 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 MB21D2Q8IYB1 491 aaPredicted RBP12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 NCOA7Q8NI08 942 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 OGFRQ9NZT2 677 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 DNAI1Q9UI46 699 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 USP54Q70EL1 1684 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 FANCCQ00597 558 aa12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 RRP12Q5JTH9 1297 aaKnown RBP12.25□□□□□ -0.45
PPP4R1-203ENST00000400556 MCAMP43121 646 aa12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 SYKP43405 635 aa12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 AXDND1Q5T1B0 1012 aaPredicted RBP12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 PDILTQ8N807 584 aa12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 KCNG4Q8TDN1 519 aa12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 NCAPHQ15003 741 aa12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 DDX41Q9UJV9 622 aaKnown RBP12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 METAP2P50579 478 aaKnown RBP eCLIP12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 KRT40Q6A162 431 aa12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 LDHAL6AQ6ZMR3 332 aa12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 UTP14AQ9BVJ6 771 aaKnown RBP12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 NBPF3Q9H094 633 aa12.24□□□□□ -0.45
PPP4R1-203ENST00000400556 SLU7O95391 586 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 TRDNQ13061 729 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 GRAMD1CQ8IYS0 662 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 C19orf44Q9H6X5 657 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 SLIT3O75094 1523 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 GRIN1Q05586 938 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 SHC4Q6S5L8 630 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 TRMT44Q8IYL2 757 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 C1orf167Q5SNV9 1468 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 NEMFO60524 1076 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 UBASH3AP57075 661 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 CTDSPL2Q05D32 466 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 IFIT5Q13325 482 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 CCDC191Q8NCU4 936 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 ZCRB1Q8TBF4 217 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 APPBP2Q92624 585 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 FEZ1Q99689 392 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 GREM2Q9H772 168 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 CNNM1Q9NRU3 951 aa12.23□□□□□ -0.45
PPP4R1-203ENST00000400556 ARFGEF2Q9Y6D5 1785 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 NLRP12P59046 1061 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 UTP14CQ5TAP6 766 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 POLR3EQ9NVU0 708 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 FANCLQ9NW38 375 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 KCNJ14Q9UNX9 436 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 RFX7Q2KHR2 1363 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 LONRF3Q496Y0 759 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 DNAJC10Q8IXB1 793 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 ZNF397Q8NF99 534 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 GTPBP4Q9BZE4 634 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 PIH1D3Q9NQM4 214 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 ZNF446Q9NWS9 450 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 SCN11AQ9UI33 1791 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 A0A1W2PQ27 194 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 A0A1W2PQ64 194 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 A0A1W2PQD8 194 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 DHX16O60231 1041 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 URI1O94763 535 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 GSDMDP57764 484 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 HLFQ16534 295 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 HSD3B7Q9H2F3 369 aa12.22□□□□□ -0.45
PPP4R1-203ENST00000400556 YEATS4O95619 227 aa12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 PDE4BQ07343 736 aa12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 FOXP4Q8IVH2 680 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 KLHL34Q8N239 644 aa12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 FANCGO15287 622 aa12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 GUCY1A2P33402 732 aa12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 PHKA1P46020 1223 aa12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 OSBPL5Q9H0X9 879 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 IQSEC3Q9UPP2 1182 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-203ENST00000400556 ARHGAP29Q52LW3 1261 aa12.21□□□□□ -0.46
PPP4R1-203ENST00000400556 CHMP4CQ96CF2 233 aa12.21□□□□□ -0.46
PPP4R1-203ENST00000400556 ERO1AQ96HE7 468 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms