RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CEP135Q66GS9 1140 aa10.46□□□□□ -0.73
SMARCA1-202ENST00000371122 TAX1BP1Q86VP1 789 aa10.46□□□□□ -0.73
SMARCA1-202ENST00000371122 TTC41PQ6P2S7 1318 aa10.46□□□□□ -0.73
SMARCA1-202ENST00000371122 FTOQ9C0B1 505 aaKnown RBP eCLIP10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 KAT14Q9H8E8 782 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 CABP5Q9NP86 173 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 KCNJ14Q9UNX9 436 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 ABCC4O15439 1325 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 NPC1L1Q9UHC9 1359 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 AHDC1Q5TGY3 1603 aaPredicted RBP10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 MCM7P33993 719 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 SSR1P43307 286 aaKnown RBP10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 ZNF174Q15697 407 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 CCDC178Q5BJE1 867 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 TMCO3Q6UWJ1 677 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 CACNA2D4Q7Z3S7 1137 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 MTERF4Q7Z6M4 381 aaKnown RBP10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 CCDC12Q8WUD4 166 aaPredicted RBP10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 AK7Q96M32 723 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 PUS7Q96PZ0 661 aaKnown RBP10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 LZTFL1Q9NQ48 299 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 SAP30BPQ9UHR5 308 aaKnown RBP10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 ANKARQ7Z5J8 1434 aa10.46□□□□□ -0.74
SMARCA1-202ENST00000371122 GPAA1O43292 621 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 WDR78Q5VTH9 848 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 RRAGBQ5VZM2 374 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.45□□□□□ -0.743e-7■■□□□ 12.2
SMARCA1-202ENST00000371122 RNF41Q9H4P4 317 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 ZSCAN16Q9H4T2 348 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 TPCN1Q9ULQ1 816 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 RPS6KB1P23443 525 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 CCDC152Q4G0S7 254 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 GPT2Q8TD30 523 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 SETDB2Q96T68 719 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 CEP131Q9UPN4 1083 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 RAD50Q92878 1312 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 USP8P40818 1118 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 LRMPQ12912 555 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 NLRP3Q96P20 1036 aa10.45□□□□□ -0.74
SMARCA1-202ENST00000371122 GTF2F1P35269 517 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 ADD1P35611 737 aaKnown RBP10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 TTF1Q15361 905 aaPredicted RBP10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 SLC52A2Q9HAB3 445 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 ATP7BP35670 1465 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 EDC4Q6P2E9 1401 aaKnown RBP10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 MACROD2A1Z1Q3 448 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 PHACTR2O75167 634 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 SBNO1A3KN83 1393 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 NEURL1BA8MQ27 555 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 UBAP1LF5GYI3 381 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 CTAGE5O15320 804 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 HSPA4P34932 840 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 LONRF3Q496Y0 759 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 ANTXR1Q9H6X2 564 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 CGNQ9P2M7 1197 aaKnown RBP10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 INSRP06213 1382 aa10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 COL22A1Q8NFW1 1626 aaPredicted RBP10.44□□□□□ -0.74
SMARCA1-202ENST00000371122 VWA3AA6NCI4 1184 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 TSPY3P0CV98 308 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 TSPY8P0CW00 308 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 CASQ1P31415 396 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 MCM6Q14566 821 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 SYCP1Q15431 976 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 BEND3Q5T5X7 828 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 SYT10Q6XYQ8 523 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 TRIM47Q96LD4 638 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 ZMYND15Q9H091 742 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 COBLO75128 1261 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 CCT6AP40227 531 aaKnown RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 ESR2Q92731 530 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 INTS4Q96HW7 963 aaKnown RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 ZNF335Q9H4Z2 1342 aaPredicted RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 ALS2Q96Q42 1657 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 PLEKHG3A1L390 1219 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 KIF5CO60282 957 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 LARGE1O95461 756 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 ZNF589Q86UQ0 364 aaPredicted RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 SSH3Q8TE77 659 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 UTP14AQ9BVJ6 771 aaKnown RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 GPHNQ9NQX3 736 aaPredicted RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 CCP110O43303 1012 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 ADORA1P30542 326 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 PDE4BQ07343 736 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 LEO1Q8WVC0 666 aaPredicted RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 TEX13AQ9BXU3 409 aaPredicted RBP10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 ACBD3Q9H3P7 528 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 GJB4Q9NTQ9 266 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 ASAP1Q9ULH1 1129 aa10.43□□□□□ -0.74
SMARCA1-202ENST00000371122 PUF60Q9UHX1 559 aaKnown RBP10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 MAGEB6P1A0A0J9YX57 407 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 GNPATO15228 680 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 CHGBP05060 677 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 UQCRFS1P1P0C7P4 283 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 ZNF827Q17R98 1081 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 KBTBD3Q8NAB2 608 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 PLBD2Q8NHP8 589 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 SRRTQ9BXP5 876 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms