RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 CCDC121Q6ZUS5 278 aa16.93■□□□□ 0.3
CUL3-202ENST00000344951 GTF3C6Q969F1 213 aa16.93■□□□□ 0.3
CUL3-202ENST00000344951 OGFRQ9NZT2 677 aa16.93■□□□□ 0.3
CUL3-202ENST00000344951 WASLO00401 505 aaPredicted RBP16.93■□□□□ 0.3
CUL3-202ENST00000344951 ANKS4BQ8N8V4 417 aa16.93■□□□□ 0.3
CUL3-202ENST00000344951 NMIQ13287 307 aaPredicted RBP16.93■□□□□ 0.3
CUL3-202ENST00000344951 CCDC170Q8IYT3 715 aa16.93■□□□□ 0.3
CUL3-202ENST00000344951 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
CUL3-202ENST00000344951 CCDC169A6NNP5 214 aa16.93■□□□□ 0.3
CUL3-202ENST00000344951 NBPF7P0C2Y1 421 aaPredicted RBP16.93■□□□□ 0.3
CUL3-202ENST00000344951 KMT5BQ4FZB7 885 aa16.93■□□□□ 0.3
CUL3-202ENST00000344951 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 CEBPAP49715 358 aaPredicted RBP16.92■□□□□ 0.3
CUL3-202ENST00000344951 SLC39A6Q13433 755 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 CPLX4Q7Z7G2 160 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 LEO1Q8WVC0 666 aaPredicted RBP16.92■□□□□ 0.3
CUL3-202ENST00000344951 DACT3Q96B18 629 aaPredicted RBP16.92■□□□□ 0.3
CUL3-202ENST00000344951 TACC3Q9Y6A5 838 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 RALGAPBQ86X10 1494 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 TFCP2L1Q9NZI6 479 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 IFNKQ9P0W0 207 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 CEP85LQ5SZL2 805 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 CCDC14Q49A88 953 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 RSPH3Q86UC2 560 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 PPP4R4Q6NUP7 873 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 GPCPD1Q9NPB8 672 aa16.92■□□□□ 0.3
CUL3-202ENST00000344951 NIP7Q9Y221 180 aaKnown RBP eCLIP16.92■□□□□ 0.3
CUL3-202ENST00000344951 DDX12PQ92771 950 aa16.91■□□□□ 0.3
CUL3-202ENST00000344951 PYM1Q9BRP8 204 aaKnown RBP16.91■□□□□ 0.3
CUL3-202ENST00000344951 CHPF2Q9P2E5 772 aa16.91■□□□□ 0.3
CUL3-202ENST00000344951 TACC1O75410 805 aa16.91■□□□□ 0.3
CUL3-202ENST00000344951 NEK11Q8NG66 645 aa16.91■□□□□ 0.3
CUL3-202ENST00000344951 ABL1P00519 1130 aa16.91■□□□□ 0.3
CUL3-202ENST00000344951 ATP8B2P98198 1209 aa16.91■□□□□ 0.3
CUL3-202ENST00000344951 CEP120Q8N960 986 aa16.91■□□□□ 0.3
CUL3-202ENST00000344951 RRP36Q96EU6 259 aaKnown RBP16.91■□□□□ 0.3
CUL3-202ENST00000344951 KIF14Q15058 1648 aa16.91■□□□□ 0.3
CUL3-202ENST00000344951 USTQ9Y2C2 406 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 C4orf50Q6ZRC1 276 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 MCM9Q9NXL9 1143 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 ANKRD36BQ8N2N9 1353 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 HPDP32754 393 aaPredicted RBP16.9■□□□□ 0.3
CUL3-202ENST00000344951 FAM204AQ9H8W3 233 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 ZNF569Q5MCW4 686 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 C10orf67Q8IYJ2 551 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 MAGEB6Q8N7X4 407 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 OPA1O60313 960 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 VIMP08670 466 aaKnown RBP16.9■□□□□ 0.3
CUL3-202ENST00000344951 MYCLP12524 364 aaPredicted RBP16.9■□□□□ 0.3
CUL3-202ENST00000344951 U2AF2P26368 475 aaKnown RBP eCLIP16.9■□□□□ 0.35e-7■■■□□ 15.5
CUL3-202ENST00000344951 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
CUL3-202ENST00000344951 C17orf53Q8N3J3 647 aaPredicted RBP16.89■□□□□ 0.3
CUL3-202ENST00000344951 USP26Q9BXU7 913 aa16.89■□□□□ 0.3
CUL3-202ENST00000344951 NSFL1CQ9UNZ2 370 aaKnown RBP16.89■□□□□ 0.3
CUL3-202ENST00000344951 IQGAP2Q13576 1575 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 ATP2A2P16615 1042 aaKnown RBP16.89■□□□□ 0.29
CUL3-202ENST00000344951 MAN1A1P33908 653 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 RFC1P35251 1148 aaPredicted RBP16.89■□□□□ 0.29
CUL3-202ENST00000344951 SARNPP82979 210 aaKnown RBP16.89■□□□□ 0.29
CUL3-202ENST00000344951 INF2Q27J81 1249 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 MCMDC2Q4G0Z9 681 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 PLEKHA4Q9H4M7 779 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 FAM114A2Q9NRY5 505 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 SPTLC2O15270 562 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 TTC31Q49AM3 519 aaPredicted RBP16.89■□□□□ 0.29
CUL3-202ENST00000344951 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 PLEKHM2Q8IWE5 1019 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 FAM184BQ9ULE4 1060 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
CUL3-202ENST00000344951 IFRD2Q12894 506 aaPredicted RBP16.88■□□□□ 0.29
CUL3-202ENST00000344951 ZNF804AQ7Z570 1209 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 SMAP1Q8IYB5 467 aaPredicted RBP16.88■□□□□ 0.29
CUL3-202ENST00000344951 ANKFY1Q9P2R3 1169 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 NBPF11Q86T75 865 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 FNBP1Q96RU3 617 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 KRT23Q9C075 422 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 PA2G4Q9UQ80 394 aaKnown RBP16.88■□□□□ 0.29
CUL3-202ENST00000344951 SPDYE16A6NNV3 312 aaPredicted RBP16.88■□□□□ 0.29
CUL3-202ENST00000344951 CCT6AP40227 531 aaKnown RBP16.88■□□□□ 0.29
CUL3-202ENST00000344951 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 SLC9C2Q5TAH2 1124 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 BSPRYQ5W0U4 402 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 BANK1Q8NDB2 785 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 JDP2Q8WYK2 163 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 ESR2Q92731 530 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
CUL3-202ENST00000344951 PSMA7O14818 248 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 APOBRQ0VD83 1088 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 CEP85Q6P2H3 762 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 KIAA1524Q8TCG1 905 aa16.88■□□□□ 0.29
CUL3-202ENST00000344951 RIOK3O14730 519 aaKnown RBP16.87■□□□□ 0.29
CUL3-202ENST00000344951 TRIM31Q9BZY9 425 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 CIB2O75838 187 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 GKAP1Q5VSY0 366 aaPredicted RBP16.87■□□□□ 0.29
CUL3-202ENST00000344951 TSTA3Q13630 321 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms