RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 MECOMQ03112 1051 aa16.96■□□□□ 0.31
SEC61B-201ENST00000223641 RSBN1LQ6PCB5 846 aaPredicted RBP16.96■□□□□ 0.31
SEC61B-201ENST00000223641 MRIQ9BWK5 157 aa16.96■□□□□ 0.31
SEC61B-201ENST00000223641 RAD17O75943 681 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 NMIQ13287 307 aaPredicted RBP16.95■□□□□ 0.3
SEC61B-201ENST00000223641 SLFNL1Q499Z3 407 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 MAGEB6Q8N7X4 407 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 APPBP2Q92624 585 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 FAM163AQ96GL9 167 aaPredicted RBP16.95■□□□□ 0.3
SEC61B-201ENST00000223641 FAM227BQ96M60 508 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 MXD3Q9BW11 206 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 HELLSQ9NRZ9 838 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 RAI14Q9P0K7 980 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 MYH2Q9UKX2 1941 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 ZNF532Q9HCE3 1301 aa16.95■□□□□ 0.3
SEC61B-201ENST00000223641 A0A0D9SFI3 127 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 SGSM2O43147 1006 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 TNIP1Q15025 636 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 AGBL3Q8NEM8 1001 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 OSBP2Q969R2 916 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 ESYT1Q9BSJ8 1104 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 BACH2Q9BYV9 841 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 IL25Q9H293 177 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 DIAPH3Q9NSV4 1193 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 RAD50Q92878 1312 aa16.94■□□□□ 0.3
SEC61B-201ENST00000223641 EIF6P56537 245 aaKnown RBP16.93■□□□□ 0.3
SEC61B-201ENST00000223641 HDLBPQ00341 1268 aaKnown RBP16.93■□□□□ 0.3
SEC61B-201ENST00000223641 C9orf131Q5VYM1 1079 aa16.93■□□□□ 0.3
SEC61B-201ENST00000223641 NAA16Q6N069 864 aaPredicted RBP16.93■□□□□ 0.3
SEC61B-201ENST00000223641 CASC1Q6TDU7 716 aa16.93■□□□□ 0.3
SEC61B-201ENST00000223641 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
SEC61B-201ENST00000223641 RUFY2Q8WXA3 655 aa16.93■□□□□ 0.3
SEC61B-201ENST00000223641 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
SEC61B-201ENST00000223641 PUS7LQ9H0K6 701 aaKnown RBP16.93■□□□□ 0.3
SEC61B-201ENST00000223641 RNF181Q9P0P0 153 aa16.93■□□□□ 0.3
SEC61B-201ENST00000223641 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
SEC61B-201ENST00000223641 CYP7A1P22680 504 aa16.92■□□□□ 0.3
SEC61B-201ENST00000223641 GSTO1P78417 241 aa16.92■□□□□ 0.3
SEC61B-201ENST00000223641 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
SEC61B-201ENST00000223641 ADGRA1Q86SQ6 560 aa16.92■□□□□ 0.3
SEC61B-201ENST00000223641 DZIP1Q86YF9 867 aaKnown RBP16.92■□□□□ 0.3
SEC61B-201ENST00000223641 SEC62Q99442 399 aaKnown RBP16.92■□□□□ 0.3
SEC61B-201ENST00000223641 TTF2Q9UNY4 1162 aaKnown RBP16.92■□□□□ 0.3
SEC61B-201ENST00000223641 GAKO14976 1311 aa16.92■□□□□ 0.3
SEC61B-201ENST00000223641 MAST3O60307 1309 aa16.92■□□□□ 0.3
SEC61B-201ENST00000223641 ZNF541Q9H0D2 1346 aa16.92■□□□□ 0.3
SEC61B-201ENST00000223641 LDHCP07864 332 aa16.91■□□□□ 0.3
SEC61B-201ENST00000223641 RPS12P25398 132 aaKnown RBP16.91■□□□□ 0.3
SEC61B-201ENST00000223641 MMP14P50281 582 aa16.91■□□□□ 0.3
SEC61B-201ENST00000223641 HHIPL2Q6UWX4 724 aa16.91■□□□□ 0.3
SEC61B-201ENST00000223641 SLF2Q8IX21 1173 aa16.91■□□□□ 0.3
SEC61B-201ENST00000223641 MROH7-TTC4A0A0A0MT08 1334 aa16.91■□□□□ 0.3
SEC61B-201ENST00000223641 M0R2C6 588 aa16.9■□□□□ 0.3
SEC61B-201ENST00000223641 SEC24BO95487 1268 aa16.9■□□□□ 0.3
SEC61B-201ENST00000223641 PPP4CP60510 307 aa16.9■□□□□ 0.3
SEC61B-201ENST00000223641 DIXDC1Q155Q3 683 aa16.9■□□□□ 0.3
SEC61B-201ENST00000223641 ZNF589Q86UQ0 364 aaPredicted RBP16.9■□□□□ 0.3
SEC61B-201ENST00000223641 KIAA0825Q8IV33 1275 aa16.9■□□□□ 0.3
SEC61B-201ENST00000223641 GPC2Q8N158 579 aa16.9■□□□□ 0.3
SEC61B-201ENST00000223641 DPF2Q92785 391 aa16.9■□□□□ 0.3
SEC61B-201ENST00000223641 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
SEC61B-201ENST00000223641 SERPINA10Q9UK55 444 aa16.9■□□□□ 0.3
SEC61B-201ENST00000223641 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
SEC61B-201ENST00000223641 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.3
SEC61B-201ENST00000223641 GPR75-ASB3A0A0A6YYF3 556 aa16.89■□□□□ 0.29
SEC61B-201ENST00000223641 EIF5BO60841 1220 aaKnown RBP16.89■□□□□ 0.29
SEC61B-201ENST00000223641 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
SEC61B-201ENST00000223641 GPAA1O43292 621 aa16.88■□□□□ 0.29
SEC61B-201ENST00000223641 EPB41L2O43491 1005 aaKnown RBP16.88■□□□□ 0.29
SEC61B-201ENST00000223641 CERS3Q8IU89 383 aa16.88■□□□□ 0.29
SEC61B-201ENST00000223641 TEKT1Q969V4 418 aa16.88■□□□□ 0.29
SEC61B-201ENST00000223641 ZDHHC15Q96MV8 337 aa16.88■□□□□ 0.29
SEC61B-201ENST00000223641 STRBPQ96SI9 672 aaKnown RBP16.88■□□□□ 0.29
SEC61B-201ENST00000223641 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
SEC61B-201ENST00000223641 CCDC171Q6TFL3 1326 aa16.88■□□□□ 0.29
SEC61B-201ENST00000223641 CDK5RAP2Q96SN8 1893 aa16.87■□□□□ 0.29
SEC61B-201ENST00000223641 USP17L8P0C7I0 530 aa16.87■□□□□ 0.29
SEC61B-201ENST00000223641 CRKP46108 304 aa16.87■□□□□ 0.29
SEC61B-201ENST00000223641 SCNN1DP51172 638 aa16.87■□□□□ 0.29
SEC61B-201ENST00000223641 MFAP1P55081 439 aaKnown RBP16.87■□□□□ 0.29
SEC61B-201ENST00000223641 ZNF280AP59817 542 aaPredicted RBP16.87■□□□□ 0.29
SEC61B-201ENST00000223641 APOBEC3HQ6NTF7 200 aaKnown RBP16.87■□□□□ 0.29
SEC61B-201ENST00000223641 CCDC129Q6ZRS4 1044 aa16.87■□□□□ 0.29
SEC61B-201ENST00000223641 MTMR14Q8NCE2 650 aa16.87■□□□□ 0.29
SEC61B-201ENST00000223641 MAGEB6P1A0A0J9YX57 407 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 FOXP2O15409 715 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 BAG3O95817 575 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 GMPSP49915 693 aaPredicted RBP16.86■□□□□ 0.29
SEC61B-201ENST00000223641 LCORLQ8N3X6 602 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 OGFOD1Q8N543 542 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 AIDAQ96BJ3 306 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 LSG1Q9H089 658 aaKnown RBP16.86■□□□□ 0.29
SEC61B-201ENST00000223641 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 GJA3Q9Y6H8 435 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
SEC61B-201ENST00000223641 ECM29Q5VYK3 1845 aa16.85■□□□□ 0.29
SEC61B-201ENST00000223641 REC8O95072 547 aa16.85■□□□□ 0.29
SEC61B-201ENST00000223641 MBD4O95243 580 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms