RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 VAX1Q5SQQ9 334 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 PEAR1Q5VY43 1037 aaPredicted RBP8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 FDX2Q6P4F2 183 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 DRAM1Q8N682 238 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 DUX5Q96PT3 197 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 A0A0G2JNJ9 132 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 C5orf63A6NC05 138 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 MARCH11A6NNE9 402 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 ZNF737O75373 536 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 HLA-GP17693 338 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 MC5RP33032 325 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 CAMPP49913 170 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 RANP62826 216 aaKnown RBP8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 ASPHD2Q6ICH7 369 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 RSG1Q9BU20 258 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 FBXL15Q9H469 300 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 Q9UFV3 132 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 GPR132Q9UNW8 380 aa8.59□□□□□ -1.03
SMARCA1-205ENST00000617310 RNASEK-C17orf49H0YIS7 233 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 CLPSP04118 112 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 P2RY4P51582 365 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 PDPNQ86YL7 162 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 SSBP3Q9BWW4 388 aaPredicted RBP8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 ATPIF1Q9UII2 106 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 MRPS18CQ9Y3D5 142 aaKnown RBP8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 ABCA12Q86UK0 2595 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 IGKV1-9A0A0C4DH69 117 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 SMIM17P0DL12 118 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 SULT1A1P50225 295 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 ANKRD55Q3KP44 614 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF818PQ6ZRF7 136 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 NUDT16L1Q9BRJ7 211 aaKnown RBP8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 NKX6-2Q9C056 277 aaPredicted RBP8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 OR5AC2Q9NZP5 309 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 POLQO75417 2590 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 A0A1B0GU03 582 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 LOC390937A0A1W2PQ73 354 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 G3V3Q6 166 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 K7ENP7 123 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 MFNGO00587 321 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 IL18BPO95998 194 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 TPPP2P59282 170 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 MMD2Q8IY49 270 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 NEUROG1Q92886 237 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 CLDN16Q9Y5I7 305 aa8.58□□□□□ -1.04
SMARCA1-205ENST00000617310 XKRY2A2RUG3 117 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 CENPVQ7Z7K6 275 aaPredicted RBP8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 ATP5SQ99766 215 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 NRIP2Q9BQI9 281 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 PITPNC1Q9UKF7 332 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 SCN8AQ9UQD0 1980 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 IGHV3OR16-12A0A075B7B8 117 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 WISP1O95388 367 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF137PP52743 207 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 RPS11P62280 158 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF429Q86V71 674 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 GPR146Q96CH1 333 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 TMEM222Q9H0R3 208 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF729A6NN14 1252 aaPredicted RBP8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 CEACAM18A8MTB9 384 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 HSPB1P04792 205 aaKnown RBP8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM157CP0CG43 387 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 ATP6V0CP27449 155 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 TEPPQ6URK8 271 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 MYPOPQ86VE0 399 aaPredicted RBP8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 TMEM252Q8N6L7 170 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM103A1Q9BTL3 118 aaKnown RBP8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 HSF4Q9ULV5 492 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 PPP1R2P9O14990 202 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 PTBP3O95758 552 aaKnown RBP8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 IGHV3-23P01764 117 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 SFTA3P0C7M3 94 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 WT1P19544 449 aaPredicted RBP8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 PPOXP50336 477 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF561Q8N587 486 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF645Q8N7E2 425 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 POM121Q96HA1 1249 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 RBM14Q96PK6 669 aaKnown RBP8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 C5orf66Q9H5L9 145 aa8.57□□□□□ -1.04
SMARCA1-205ENST00000617310 FLNBO75369 2602 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 PTPRDP23468 1912 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 LINC00869P0C866 280 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FABP4P15090 132 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 GNG4P50150 75 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FXYD3Q14802 87 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 OR10C1Q96KK4 312 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 ZDHHC11Q9H8X9 412 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 UFC1Q9Y3C8 167 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FREM1Q5H8C1 2179 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 J3QW42 95 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF207O43670 478 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 PAGE4O60829 102 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 NBL1P41271 181 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 P2RY1P47900 373 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 ATP6V1FQ16864 119 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 C10orf113Q5VZT2 155 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 MAPK1IP1LQ8NDC0 245 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 LYZL4Q96KX0 146 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 TECRQ9NZ01 308 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms