RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ELK1P19419 428 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 VDAC1P21796 283 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 ECI1P42126 302 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 RPS16P62249 146 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 PLGLAQ15195 96 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 C5orf64Q2M2E5 130 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 ZNF645Q8N7E2 425 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 ZNF383Q8NA42 475 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 MYOZ3Q8TDC0 251 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 RITA1Q96K30 269 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 SCPEP1Q9HB40 452 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 SLC35D1Q9NTN3 355 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 ZNF107Q9UII5 783 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 C3orf84H3BNL1 204 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 J3QRK9 145 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 SULT1C2O00338 296 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 RRHO14718 337 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 TUSC2O75896 110 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 TPPPO94811 219 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 NDUFA3O95167 84 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 HLA-DRB1P01911 266 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 OR5H8P0DN80 308 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 FCGR2CP31995 323 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 LGALS7P47929 136 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 SPCS2Q15005 226 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 CDK10Q15131 360 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 RTL8BQ17RB0 113 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 ADAM30Q9UKF2 790 aa13.66□□□□□ -0.22
SHKBP1-203ENST00000594298 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
SHKBP1-203ENST00000594298 SPDEFO95238 335 aa13.65□□□□□ -0.22
SHKBP1-203ENST00000594298 CNTFRP26992 372 aa13.65□□□□□ -0.22
SHKBP1-203ENST00000594298 TAS2R46P59540 309 aa13.65□□□□□ -0.22
SHKBP1-203ENST00000594298 GIMAP1Q8WWP7 306 aa13.65□□□□□ -0.22
SHKBP1-203ENST00000594298 ZNF256Q9Y2P7 627 aaPredicted RBP13.65□□□□□ -0.22
SHKBP1-203ENST00000594298 RGS5O15539 181 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 FCER2P06734 321 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 NAT1P18440 290 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 DUTP33316 252 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 INSL3P51460 131 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 MSMO1Q15800 293 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 SNX29P2Q8IUI4 249 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 ZBTB34Q8NCN2 500 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 BVESQ8NE79 360 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 OR11H1Q8NG94 326 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 OR5H2Q8NGV7 314 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 GPX8Q8TED1 209 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 SNAPC3Q92966 411 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 RBMXL1Q96E39 390 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 UBE2E2Q96LR5 201 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 CCDC59Q9P031 241 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 EXTL2Q9UBQ6 330 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 ANAPC10Q9UM13 185 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 RBMX2Q9Y388 322 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 PRELID3BQ9Y3B1 194 aa13.64□□□□□ -0.23
SHKBP1-203ENST00000594298 PPYP01298 95 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 PPIFP30405 207 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 LINC00205P59089 165 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 RUNX1Q01196 453 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 KIAA0141Q14154 515 aaPredicted RBP13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 PSG5Q15238 335 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 ZNF660Q6AZW8 331 aaPredicted RBP13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 DYNC2LI1Q8TCX1 351 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 BORCS5Q969J3 196 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 ISOC1Q96CN7 298 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 HSD17B10Q99714 261 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 OR51J1Q9H342 316 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 FBXL15Q9H469 300 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 EHFQ9NZC4 300 aa13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 METTL1Q9UBP6 276 aaKnown RBP13.63□□□□□ -0.23
SHKBP1-203ENST00000594298 CCDC160A6NGH7 325 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 H3BMQ9 156 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 I3L521 148 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 SHOXO15266 292 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 IGKV1-16P04430 117 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 OR8U8P0C7N1 319 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 AADACP22760 399 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 RCVRNP35243 200 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 HERV-K104P61576 105 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 TMEM177Q53S58 311 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 DHRS11Q6UWP2 260 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 ZNF66Q6ZN08 573 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 OVCH2Q7RTZ1 564 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 SECTM1Q8WVN6 248 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 C5orf30Q96GV9 206 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 ASCL2Q99929 193 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 RABL2AQ9UBK7 228 aaPredicted RBP13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 RABL2BQ9UNT1 228 aa13.62□□□□□ -0.23
SHKBP1-203ENST00000594298 IGHV7-81A0A0B4J1V7 117 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 IGKV1D-13A0A0B4J2D9 117 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 IGLV1-40P01703 118 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 PMP2P02689 132 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 IGKV1-13P0DP09 117 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 TMEM267Q0VDI3 215 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 DYRK1AQ13627 763 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 ASPHD1Q5U4P2 390 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 KCTD9Q7L273 389 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 ZNF491Q8N8L2 437 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 OR1N2Q8NGR9 330 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 OR6F1Q8NGZ6 308 aa13.61□□□□□ -0.23
SHKBP1-203ENST00000594298 OSR1Q8TAX0 266 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms