RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 DBX1A6NMT0 343 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 A8MV72 311 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 TIMM23O14925 209 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 HPRT1P00492 218 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 TRAPPC2P0DI81 140 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 TRAPPC2BP0DI82 140 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 RRAS2P62070 204 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 SSX2Q16385 188 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 MOB3BQ86TA1 216 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 ZNF695Q8IW36 515 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 DYNAPQ8N1N2 210 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 C17orf50Q8WW18 174 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 PRR13Q9NZ81 148 aa13.48□□□□□ -0.25
CDK5RAP3-215ENST00000579780 hCG_2014768A0A024R1R8 64 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 ATG12O94817 140 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 S1PR2O95136 353 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 CRYZL1O95825 349 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 IGKV1-39P01597 117 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 IGKV1D-39P04432 117 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 FBP1P09467 338 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 CD1BP29016 333 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 LPAR6P43657 344 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 TMEM177Q53S58 311 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 TMEM268Q5VZI3 342 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 SELENOHQ8IZQ5 122 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 CADM3Q8N126 398 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 OSR1Q8TAX0 266 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 MED28Q9H204 178 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 RAB18Q9NP72 206 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 CSPG4Q6UVK1 2322 aa13.47□□□□□ -0.25
CDK5RAP3-215ENST00000579780 CELSR1Q9NYQ6 3014 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 A0A0U1RQK1 487 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 VGLL3A8MV65 326 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 H7C2Y5 167 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 DYNLT3P51808 116 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 POU2AF1Q16633 256 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 LIN54Q6MZP7 749 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 SLC35G3Q8N808 338 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 OR4C13Q8NGP0 309 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 OR5M8Q8NGP6 311 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 CHAC2Q8WUX2 184 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 MEGF9Q9H1U4 602 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 YAE1D1Q9NRH1 226 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 TMED3Q9Y3Q3 217 aa13.46□□□□□ -0.25
CDK5RAP3-215ENST00000579780 IGHV3-72A0A0B4J1Y9 119 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 VENTXO95231 258 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 IGKV1-16P04430 117 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 SULT1A3P0DMM9 295 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 SULT1A4P0DMN0 295 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 CD99P14209 185 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 NQO2P16083 231 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 HLA-GP17693 338 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 HNF1AP20823 631 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 VDAC1P21796 283 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 BRS3P32247 399 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 BCAP31P51572 246 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 AKR1C2P52895 323 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 AANATQ16613 207 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 FAM120AOSQ5T036 256 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 LSM10Q969L4 123 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 FLYWCH2Q96CP2 140 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 R3HDM4Q96D70 268 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 HARBI1Q96MB7 349 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 RNF5Q99942 180 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 MS4A7Q9GZW8 240 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 FAM96BQ9Y3D0 163 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 ACANP16112 2415 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 TEX15Q9BXT5 2789 aa13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 ANK3Q12955 4377 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-215ENST00000579780 TLN2Q9Y4G6 2542 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 SETXQ7Z333 2677 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 MARCH11A6NNE9 402 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 FAM90A9PA6NNJ1 464 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 HRASP01112 189 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 ERVK-16P61578 105 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 FCN2Q15485 313 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 NMSQ5H8A3 153 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 THNSL2Q86YJ6 484 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 FAM219AQ8IW50 185 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 UXS1Q8NBZ7 420 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 SEC22AQ96IW7 307 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 AIFM2Q9BRQ8 373 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 MGAT4CQ9UBM8 478 aa13.44□□□□□ -0.26
CDK5RAP3-215ENST00000579780 HMX3A6NHT5 357 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 GOSR2O14653 212 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 SHOXO15266 292 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 SPDEFO95238 335 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 IFNA21P01568 189 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 IGKV1D-33P01593 117 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 IGKV1-33P01594 117 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 IGKV1-5P01602 117 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 HOXB5P09067 269 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 P0C879 139 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 PAX6P26367 422 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 EBI3Q14213 229 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 LRRC75BQ2VPJ9 315 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 GGNBP1Q5YKI7 109 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 LYZL2Q7Z4W2 148 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 OR11H7Q8NGC8 314 aa13.43□□□□□ -0.26
CDK5RAP3-215ENST00000579780 RNASE11Q8TAA1 199 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms