RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 AKR1C2P52895 323 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 AP2S1P53680 142 aaPredicted RBP8.3□□□□□ -1.08
SS18-207ENST00000577636 ZNF345Q14585 488 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 OPCMLQ14982 345 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 C17orf58Q2M2W7 97 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 LGALSLQ3ZCW2 172 aaPredicted RBP8.3□□□□□ -1.08
SS18-207ENST00000577636 TMEM155Q4W5P6 130 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 LAMTOR1Q6IAA8 161 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 DUX4L9Q6RFH8 374 aaPredicted RBP8.3□□□□□ -1.08
SS18-207ENST00000577636 LYPD2Q6UXB3 125 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 ACOT7LQ6ZUV0 252 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 ZNF767PQ75MW2 155 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 SELENOHQ8IZQ5 122 aaKnown RBP8.3□□□□□ -1.08
SS18-207ENST00000577636 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.3□□□□□ -1.08
SS18-207ENST00000577636 OR8H1Q8NGG4 311 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 OR10C1Q96KK4 312 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 ZNF48Q96MX3 618 aaPredicted RBP8.3□□□□□ -1.08
SS18-207ENST00000577636 ABHD14AQ9BUJ0 271 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 ARL6Q9H0F7 186 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 LINC00574Q9H8X3 128 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 MMP26Q9NRE1 261 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 TNFRSF19Q9NS68 423 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 FAM212BQ9NTI7 297 aaPredicted RBP8.3□□□□□ -1.08
SS18-207ENST00000577636 DUX4Q9UBX2 424 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 PRELID3BQ9Y3B1 194 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 AUP1Q9Y679 476 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 WNK2Q9Y3S1 2297 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 TRAV14DV4A0A0A6YYC5 116 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 A0A1B0GU03 582 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 G3V3Q6 166 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 WRBO00258 174 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 TNFRSF13BO14836 293 aaPredicted RBP8.29□□□□□ -1.08
SS18-207ENST00000577636 RAB29O14966 203 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 ST8SIA3O43173 380 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 FOXH1O75593 365 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 FSHBP01225 129 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 IFNA7P01567 189 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 IGHV2-70P01814 119 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 CGB3P0DN86 165 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 CGB7P0DN87 165 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 KIR2DS2P43631 304 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 RAB32Q13637 225 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 NDUFA5Q16718 116 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 Q3ZCU0 254 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 TMUB2Q71RG4 321 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 FOXRED2Q8IWF2 684 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 OR1S1Q8NH92 325 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 NEIL1Q96FI4 390 aaPredicted RBP8.29□□□□□ -1.08
SS18-207ENST00000577636 ABHD14BQ96IU4 210 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 S1PR3Q99500 378 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 PARP12Q9H0J9 701 aaKnown RBP8.29□□□□□ -1.08
SS18-207ENST00000577636 MBD2Q9UBB5 411 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 RPUSD1Q9UJJ7 312 aaKnown RBP8.29□□□□□ -1.08
SS18-207ENST00000577636 TNFSF18Q9UNG2 199 aa8.29□□□□□ -1.08
SS18-207ENST00000577636 LSM5Q9Y4Y9 91 aaKnown RBP8.29□□□□□ -1.08
SS18-207ENST00000577636 SOX21Q9Y651 276 aaPredicted RBP8.29□□□□□ -1.08
SS18-207ENST00000577636 E5RGE8 158 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 M0R1X1 148 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 RNASE1P07998 156 aaKnown RBP8.28□□□□□ -1.08
SS18-207ENST00000577636 SLC25A6P12236 298 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 CXCL2P19875 107 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 LPAR6P43657 344 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 NKX2-1P43699 371 aaPredicted RBP8.28□□□□□ -1.08
SS18-207ENST00000577636 LOXL3P58215 753 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 RAB14P61106 215 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 VAMP2P63027 116 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 KLF17Q5JT82 389 aaPredicted RBP8.28□□□□□ -1.08
SS18-207ENST00000577636 PRAMEF5Q5TYX0 476 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 TMEM200BQ69YZ2 307 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 HEPN1Q6WQI6 88 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 FAM219AQ8IW50 185 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 SPAG16Q8N0X2 631 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 KCNRGQ8N5I3 272 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 KIR3DL3Q8N743 410 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 LSM10Q969L4 123 aaKnown RBP8.28□□□□□ -1.08
SS18-207ENST00000577636 ADTRPQ96IZ2 230 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 PLEKHA2Q9HB19 425 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 C19orf12Q9NSK7 152 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 SDHAF2Q9NX18 166 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 GAB2Q9UQC2 676 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 NSG2Q9Y328 171 aa8.28□□□□□ -1.08
SS18-207ENST00000577636 TGP01266 2768 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 MPTX1A8MV57 137 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 K7EPK0 472 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 DEDDO75618 318 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 IGLV2-14P01704 120 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 LYL1P12980 280 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 IL3RAP26951 378 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 EIF5AP63241 154 aaKnown RBP8.27□□□□□ -1.09
SS18-207ENST00000577636 IL15RAQ13261 267 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 BTNL3Q6UXE8 466 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 SLC51BQ86UW2 128 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 C1QL4Q86Z23 238 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 LYG1Q8N1E2 194 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 FAM71E2Q8N5Q1 922 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 LHFPL5Q8TAF8 219 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 GPHA2Q96T91 129 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 AGMATQ9BSE5 352 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 CTSZQ9UBR2 303 aa8.27□□□□□ -1.09
SS18-207ENST00000577636 POMT1Q9Y6A1 747 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms