RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 LINC00854A0A1B0GVQ3 168 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 TMEM30CPA0ZSE6 113 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 RBMY1BA6NDE4 496 aaKnown RBP9.55□□□□□ -0.88
CAPN1-223ENST00000533079 RBMY1EA6NEQ0 496 aaKnown RBP9.55□□□□□ -0.88
CAPN1-223ENST00000533079 FOXI3A8MTJ6 420 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-223ENST00000533079 G3V318 75 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 C15orf65H3BRN8 121 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 SLC25A17O43808 307 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 RBMY1DP0C7P1 496 aaKnown RBP9.55□□□□□ -0.88
CAPN1-223ENST00000533079 TRAPPC2P0DI81 140 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 TRAPPC2BP0DI82 140 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 HLA-DMAP28067 261 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 CRIP2P52943 208 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-223ENST00000533079 ACTBP60709 375 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 OR10K2Q6IF99 312 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 FAM53AQ6NSI3 398 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-223ENST00000533079 SLC25A48Q6ZT89 311 aaKnown RBP9.55□□□□□ -0.88
CAPN1-223ENST00000533079 GTSCR1Q86UQ5 136 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 TMEM229BQ8NBD8 167 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 TNFAIP8L1Q8WVP5 186 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 LINC00476Q8WZB0 136 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 S100A13Q99584 98 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 NEURL2Q9BR09 285 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 ALX4Q9H161 411 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-223ENST00000533079 METTL9Q9H1A3 318 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 HRASLSQ9HDD0 168 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 KLK11Q9UBX7 282 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 NUBP2Q9Y5Y2 271 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 WSB1Q9Y6I7 421 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 KIAA2026Q5HYC2 2103 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 IGHV7-81A0A0B4J1V7 117 aa9.54□□□□□ -0.88
CAPN1-223ENST00000533079 ZNF736B4DX44 427 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-223ENST00000533079 CSTBP04080 98 aaKnown RBP9.54□□□□□ -0.88
CAPN1-223ENST00000533079 HSPB1P04792 205 aaKnown RBP9.54□□□□□ -0.88
CAPN1-223ENST00000533079 BTCP35070 178 aa9.54□□□□□ -0.88
CAPN1-223ENST00000533079 FAUP35544 74 aaKnown RBP9.54□□□□□ -0.88
CAPN1-223ENST00000533079 CDNFQ49AH0 187 aa9.54□□□□□ -0.88
CAPN1-223ENST00000533079 C19orf54Q5BKX5 351 aa9.54□□□□□ -0.88
CAPN1-223ENST00000533079 ARL11Q969Q4 196 aa9.54□□□□□ -0.88
CAPN1-223ENST00000533079 DPCDQ9BVM2 203 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-223ENST00000533079 TMEM59Q9BXS4 323 aa9.54□□□□□ -0.88
CAPN1-223ENST00000533079 ING4Q9UNL4 249 aa9.54□□□□□ -0.88
CAPN1-223ENST00000533079 FOXA2Q9Y261 457 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-223ENST00000533079 A0A1W2PN81 502 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 INMT-MINDY4F8WBC2 141 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 H0Y980 276 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 NBR2O15453 112 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 CRTAPO75718 401 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-223ENST00000533079 CD74P04233 296 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 TCRBP04435 133 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 GTF2F2P13984 249 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 NAT1P18440 290 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 TBPP20226 339 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 BLVRBP30043 206 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-223ENST00000533079 CHRNA7P36544 502 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 CBX5P45973 191 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 TMEM50BP56557 158 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 MOGAT2Q3SYC2 334 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 SLC22A6Q4U2R8 563 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 NHLRC3Q5JS37 347 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 ZNF554Q86TJ5 538 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 LINC00596Q86U02 117 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 SUMF2Q8NBJ7 301 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 ZNF439Q8NDP4 499 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 DDB2Q92466 427 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 KCNK15Q9H427 330 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 HSF4Q9ULV5 492 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 ANAPC10Q9UM13 185 aa9.53□□□□□ -0.88
CAPN1-223ENST00000533079 A0A0A6YYD4 124 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 HMX3A6NHT5 357 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 FAM90A7PA6NKC0 464 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 FAM90A23PA8MXZ1 464 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 C12orf77C9JDV5 145 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 NDUFA3O95167 84 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 DHFRP00374 187 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 AKAIN1P0CW23 69 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 HIST1H1DP16402 221 aaKnown RBP9.52□□□□□ -0.89
CAPN1-223ENST00000533079 MGMTP16455 207 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 CNTFRP26992 372 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 RCVRNP35243 200 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 MECP2P51608 486 aaKnown RBP9.52□□□□□ -0.89
CAPN1-223ENST00000533079 TAS2R19P59542 299 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 C5orf64Q2M2E5 130 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 PIGYQ3MUY2 71 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 LIN54Q6MZP7 749 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 RAB3CQ96E17 227 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 Q96M66 194 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 ZNF251Q9BRH9 671 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 RSRP1Q9BUV0 290 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 SELENOIQ9C0D9 397 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 SLA2Q9H6Q3 261 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 TUBA4BQ9H853 241 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 KIAA1456Q9P272 454 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 RNF150Q9ULK6 438 aa9.52□□□□□ -0.89
CAPN1-223ENST00000533079 C7orf66A4D0T2 115 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 MFNGO00587 321 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 SPINT2O43291 252 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 SOX15O60248 233 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 ZP3P21754 424 aa9.51□□□□□ -0.89
CAPN1-223ENST00000533079 TMEM267Q0VDI3 215 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms