RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PTPRSQ13332 1948 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 DICER1Q9UPY3 1922 aaKnown RBP-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 NAV1Q8NEY1 1877 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 GLI3P10071 1580 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 NUP160Q12769 1436 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 NPATQ14207 1427 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 A0A087WUU8 490 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 TRBV6-7A0A0A0MS04 114 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 TRAV38-1A0A0B4J264 116 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 A0A1B0GW54 56 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 A0A1B0GX12 115 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 OR51F1A6NGY5 319 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 COPEO14579 308 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 ITGB1BP1O14713 200 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 MPZL2O60487 215 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 HBZP02008 142 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 LGALS1P09382 135 aaKnown RBP-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 TRGC1P0CF51 173 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 SNAP25P60880 206 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 TBPL1P62380 186 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 HERVK_113P63121 156 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 SRSF6Q13247 344 aaKnown RBP-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 OR10J3Q5JRS4 329 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 AHSA2Q719I0 299 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 LRRC6Q86X45 466 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 C1orf158Q8N1D5 194 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 RPP25LQ8N5L8 163 aaKnown RBP-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 OR8B3Q8NGG8 313 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 SFRP2Q96HF1 295 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 IMMP2LQ96T52 175 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 CHST6Q9GZX3 395 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 C10orf95Q9H7T3 257 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 RPRD1BQ9NQG5 326 aaKnown RBP-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 OR5AC2Q9NZP5 309 aa-0.02□□□□□ -2.41
CCDC93-209ENST00000488908 SCAF11Q99590 1463 aaKnown RBP-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 KIF27Q86VH2 1401 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 CHD2O14647 1828 aaKnown RBP-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 SYNRGQ9UMZ2 1314 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 LOC110117498A0A087WWA1 95 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 TRAV14DV4A0A0A6YYC5 116 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 TRAV8-1A0A0A6YYK1 113 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 IBA57-AS1B1ANH7 110 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 F5H5K5 113 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 GOLGA8RI6L899 631 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 SDCBPO00560 298 aaPredicted RBP-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 MRASO14807 208 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 COCHO43405 550 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 ARL6IP5O75915 188 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 OTCP00480 354 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 PTNP21246 168 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 UBE2KP61086 200 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 RAB14P61106 215 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 FKBP1AP62942 108 aaKnown RBP-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 NDUFA5Q16718 116 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 TMEM249Q2WGJ8 235 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 LRRC34Q8IZ02 419 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 C9orf163Q8N9P6 203 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 OR4C6Q8NH72 309 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 CCDC12Q8WUD4 166 aaPredicted RBP-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 TMEM239Q8WW34 195 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 TLCD1Q96CP7 247 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 SMIM12Q96EX1 92 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 MAT2BQ9NZL9 334 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 EMC3Q9P0I2 261 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 CLEC2DQ9UHP7 191 aa-0.03□□□□□ -2.41
CCDC93-209ENST00000488908 SETD5Q9C0A6 1442 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 TONSLQ96HA7 1378 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 CACNA1EQ15878 2313 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 A0A1W2PPM0 123 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 RAB19A4D1S5 217 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 H3BT86 120 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 SHBGP04278 402 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 UBBP0CG47 229 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 RNASE3P12724 160 aaKnown RBP-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 CFL1P23528 166 aaKnown RBP-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 RPL28P46779 137 aaKnown RBP-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 CLEC12BQ2HXU8 276 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 ACSM3Q53FZ2 586 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 DHFR2Q86XF0 187 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 BAP18Q8IXM2 172 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 Q8N6K4 173 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 CDRT4Q8N9R6 151 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 TESCQ96BS2 214 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 C12orf43Q96C57 262 aaKnown RBP-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 LRRC45Q96CN5 670 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 NMNAT3Q96T66 252 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 TTTY13Q9BZ97 58 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 YIPF3Q9GZM5 350 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 CD300AQ9UGN4 299 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 NXT1Q9UKK6 140 aaKnown RBP-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 LHFPL6Q9Y693 200 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 REREQ9P2R6 1566 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 FRAS1Q86XX4 4008 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 KCPQ6ZWJ8 1503 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 SIPA1L1O43166 1804 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 NAV3Q8IVL0 2385 aa-0.04□□□□□ -2.42
CCDC93-209ENST00000488908 FLT4P35916 1363 aa-0.05□□□□□ -2.42
CCDC93-209ENST00000488908 KIAA0232Q92628 1395 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms