RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CD5LO43866 347 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 SMIM24O75264 130 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR7C1O76099 320 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 IGLV1-47P01700 117 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 GUSBP08236 651 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 CST2P09228 141 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 LINC00032P0C843 101 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 TCN2P20062 427 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 CD34P28906 385 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 TSPOP30536 169 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 APLNRP35414 380 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF140P52738 457 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 CRYBA4P53673 196 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 TAS2R41P59536 307 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 HIST1H3AP68431 136 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 H3F3AP84243 136 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 FLI1Q01543 452 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 FMODQ06828 376 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 DAZ2Q13117 558 aaKnown RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 C1DQ13901 141 aaKnown RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 CCSMST1Q4G0I0 132 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF658BQ4V348 819 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 PYCR3Q53H96 274 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 FBXW9Q5XUX1 488 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR10K2Q6IF99 312 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 OLIG3Q7RTU3 272 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 C11orf42Q8N5U0 333 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 C11orf72Q8NBR9 251 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 LINC01006Q8NI28 216 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF420Q8TAQ5 688 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 PIFOQ8TCI5 191 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 HAVCR2Q8TDQ0 301 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 FGF13Q92913 245 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMBIM1Q969X1 311 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 BORCS7Q96B45 105 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 PHYHIPLQ96FC7 376 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR10C1Q96KK4 312 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR2V2Q96R30 315 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 TRIB3Q96RU7 358 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 CGREF1Q99674 301 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 HSD17B10Q99714 261 aaKnown RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 EMC6Q9BV81 110 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 VSIRQ9H7M9 311 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 DAZ3Q9NR90 486 aaKnown RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 HEBP1Q9NRV9 189 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 ANGPT4Q9Y264 503 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 PRELID3BQ9Y3B1 194 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR51B4Q9Y5P0 310 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 CPAMD8Q8IZJ3 1885 aa2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 RANBP2P49792 3224 aaKnown RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 RAI1Q7Z5J4 1906 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P25-201ENST00000468402 SPAG17Q6Q759 2223 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 UNC13CQ8NB66 2214 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 A0A1B0GV50 99 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 LOC285095A0A1B0GVY8 99 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF729A6NN14 1252 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR11H12B2RN74 326 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 NDUFC2-KCTD14E9PQ53 114 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 LINC01619G3V211 115 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 K7EPK0 472 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 UBFD1O14562 309 aaKnown RBP2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 NDUFS5O43920 106 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 SS18L1O75177 396 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 IGKV3-15P01624 115 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 IGLV2-23P01705 113 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 C1QCP02747 245 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 FREM3P0C091 2139 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR4A8P0C604 315 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 CISD3P0C7P0 127 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 HIST1H1TP22492 207 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 PAX6P26367 422 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 CRABP1P29762 137 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 MPIP34949 423 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 CCR6P51684 374 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF136P52737 540 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMEM33P57088 247 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 SYNJ2BPP57105 145 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 DSCR10P59022 87 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 RPL23P62829 140 aaKnown RBP2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 RAP1AP62834 184 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 ELF3P78545 371 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 PRR3P79522 188 aaKnown RBP2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 SPCS2Q15005 226 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 CDK10Q15131 360 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 RSPO1Q2MKA7 263 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMEM255AQ5JRV8 349 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMEM42Q69YG0 159 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 C4orf22Q6V702 233 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 Q6ZR54 194 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 TMEM144Q7Z5S9 345 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 NAA40Q86UY6 237 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 ZNF429Q86V71 674 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 MDP1Q86V88 176 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 SLC35G3Q8N808 338 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 SLC26A10Q8NG04 563 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR11H1Q8NG94 326 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 GPR32P1Q8NGA4 272 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR10G4Q8NGN3 311 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR9I1Q8NGQ6 314 aa2.61□□□□□ -1.99
HMGB1P25-201ENST00000468402 OR1P1Q8NH06 330 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms