RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 FRAS1Q86XX4 4008 aa13.03□□□□□ -0.32
HMGN1-209ENST00000463631 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.02□□□□□ -0.33
HMGN1-209ENST00000463631 MSGN1A6NI15 193 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 SRRM4A7MD48 611 aaKnown RBP13.02□□□□□ -0.33
HMGN1-209ENST00000463631 SHOXO15266 292 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 UCHL1P09936 223 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 RRASP10301 218 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 TMEM50BP56557 158 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 UBE2KP61086 200 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 PRSS8Q16651 343 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 DEFB114Q30KQ6 69 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 HSD17B12Q53GQ0 312 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 TEX45Q8NA69 505 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 FBLIM1Q8WUP2 373 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 SRSF12Q8WXF0 261 aaKnown RBP13.02□□□□□ -0.33
HMGN1-209ENST00000463631 C5orf30Q96GV9 206 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 ARHGAP5-AS1Q96IT6 56 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 PHB2Q99623 299 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 CMSS1Q9BQ75 279 aaKnown RBP13.02□□□□□ -0.33
HMGN1-209ENST00000463631 CABLES2Q9BTV7 478 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 WFDC10AQ9H1F0 79 aa13.02□□□□□ -0.33
HMGN1-209ENST00000463631 OR11H12B2RN74 326 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 SLC17A2O00624 439 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 TUSC2O75896 110 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 APELAP0DMC3 54 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 ZNF45Q02386 682 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 VMA21Q3ZAQ7 101 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 DHRSXQ8N5I4 330 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 DYNLRB2Q8TF09 96 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 DDB2Q92466 427 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 KCTD12Q96CX2 325 aaKnown RBP13.01□□□□□ -0.33
HMGN1-209ENST00000463631 PECRQ9BY49 303 aa13.01□□□□□ -0.33
HMGN1-209ENST00000463631 TECRQ9NZ01 308 aaKnown RBP13.01□□□□□ -0.33
HMGN1-209ENST00000463631 TRBV6-7A0A0A0MS04 114 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 FABP7O15540 132 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 GNAO1P09471 354 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 KIR2DS2P43631 304 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 ATP5G2Q06055 141 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 P2RY14Q15391 338 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 TNXAQ16473 311 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 PLAC9Q5JTB6 97 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 CEACAM19Q7Z692 300 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 C8orf59Q8N0T1 100 aaPredicted RBP13□□□□□ -0.33
HMGN1-209ENST00000463631 NECAP1Q8NC96 275 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 GFI1Q99684 422 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 MND1Q9BWT6 205 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 KRTAP17-1Q9BYP8 105 aa13□□□□□ -0.33
HMGN1-209ENST00000463631 C2orf70A6NJV1 201 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 LGALS9O00182 355 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 MPPED1O15442 326 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 CREBL2O60519 120 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-209ENST00000463631 TPBGQ13641 420 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 OR56B1Q8NGI3 324 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 OSR1Q8TAX0 266 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-209ENST00000463631 ADTRPQ96IZ2 230 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 SPIN2AQ99865 258 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 SPIN2BQ9BPZ2 258 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 LSM2Q9Y333 95 aaKnown RBP12.99□□□□□ -0.33
HMGN1-209ENST00000463631 DMRT1Q9Y5R6 373 aa12.99□□□□□ -0.33
HMGN1-209ENST00000463631 CDK1P06493 297 aa12.98□□□□□ -0.33
HMGN1-209ENST00000463631 FOLR2P14207 255 aa12.98□□□□□ -0.33
HMGN1-209ENST00000463631 GUCA2BQ16661 112 aa12.98□□□□□ -0.33
HMGN1-209ENST00000463631 IGSF11Q5DX21 431 aa12.98□□□□□ -0.33
HMGN1-209ENST00000463631 SLC16A13Q7RTY0 426 aa12.98□□□□□ -0.33
HMGN1-209ENST00000463631 TTC9CQ8N5M4 171 aa12.98□□□□□ -0.33
HMGN1-209ENST00000463631 OR10J5Q8NHC4 309 aa12.98□□□□□ -0.33
HMGN1-209ENST00000463631 ZNF430Q9H8G1 570 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-209ENST00000463631 BET1O15155 118 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 CRYZL1O95825 349 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 PRH1P02810 166 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 FCGR3AP08637 254 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 CD3GP09693 182 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 DUTP33316 252 aaKnown RBP12.97□□□□□ -0.33
HMGN1-209ENST00000463631 SPHARQ15513 63 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 RAB11BQ15907 218 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 C15orf32Q32M92 178 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 IDO2Q6ZQW0 420 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 BPIFB6Q8NFQ5 453 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 ACOT12Q8WYK0 555 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 WDR89Q96FK6 387 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-209ENST00000463631 KCNK7Q9Y2U2 307 aa12.97□□□□□ -0.33
HMGN1-209ENST00000463631 A8MWP6 167 aa12.96□□□□□ -0.33
HMGN1-209ENST00000463631 GGCTO75223 188 aaKnown RBP12.96□□□□□ -0.33
HMGN1-209ENST00000463631 CDK10Q15131 360 aa12.96□□□□□ -0.33
HMGN1-209ENST00000463631 MMD2Q8IY49 270 aa12.96□□□□□ -0.33
HMGN1-209ENST00000463631 OVOL2Q9BRP0 275 aa12.96□□□□□ -0.33
HMGN1-209ENST00000463631 GGTLC1Q9BX51 225 aa12.96□□□□□ -0.33
HMGN1-209ENST00000463631 ZNF257Q9Y2Q1 563 aa12.96□□□□□ -0.33
HMGN1-209ENST00000463631 NUPR2A6NF83 97 aa12.95□□□□□ -0.34
HMGN1-209ENST00000463631 ERICH4A6NGS2 130 aa12.95□□□□□ -0.34
HMGN1-209ENST00000463631 LINC00473A8K010 186 aa12.95□□□□□ -0.34
HMGN1-209ENST00000463631 PPP5D1E7EU14 171 aa12.95□□□□□ -0.34
HMGN1-209ENST00000463631 ACTL6BO94805 426 aa12.95□□□□□ -0.34
HMGN1-209ENST00000463631 GSTT2P0CG29 244 aa12.95□□□□□ -0.34
HMGN1-209ENST00000463631 GSTT2BP0CG30 244 aa12.95□□□□□ -0.34
HMGN1-209ENST00000463631 SAA1P0DJI8 122 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-209ENST00000463631 EDN2P20800 178 aa12.95□□□□□ -0.34
HMGN1-209ENST00000463631 RANBP1P43487 201 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms