RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ARPC1BO15143 372 aaKnown RBP3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 HSPA12AO43301 675 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 NDUFA3O95167 84 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 NAPSAO96009 420 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 IGKV1-16P04430 117 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 HSPB1P04792 205 aaKnown RBP3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 CDK1P06493 297 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 FRMD6-AS1P0C7T7 363 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 HSMCR30P0CW71 290 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 APELAP0DMC3 54 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 CD37P11049 281 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 GP9P14770 177 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 MAPK3P27361 379 aaPredicted RBP3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 VEGFCP49767 419 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 INSL3P51460 131 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 BLOC1S1P78537 153 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 RUNX1Q01196 453 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 DEFA5Q01523 94 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 PJVKQ0ZLH3 352 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 DCTN2Q13561 401 aaKnown RBP3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 FXYD3Q14802 87 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 PSG5Q15238 335 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 SPHARQ15513 63 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 MED22Q15528 200 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 C2orf76Q3KRA6 126 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 TMEM30BQ3MIR4 351 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 HSD17B12Q53GQ0 312 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ACTBL2Q562R1 376 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 OGFRL1Q5TC84 451 aaPredicted RBP3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 LIPKQ5VXJ0 399 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF660Q6AZW8 331 aaPredicted RBP3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ACSM6Q6P461 480 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF880Q6PDB4 577 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 TMEM91Q6ZNR0 172 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF554Q86TJ5 538 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF429Q86V71 674 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 NKAIN3Q8N8D7 197 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF383Q8NA42 475 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 KCNG3Q8TAE7 436 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ARPC1AQ92747 370 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ARHGAP5-AS1Q96IT6 56 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 CHCHD6Q9BRQ6 235 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 TM2D1Q9BX74 207 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 TMEM59Q9BXS4 323 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 LPAR5Q9H1C0 372 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 Q9N2K0 584 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ISYNA1Q9NPH2 558 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF355PQ9NSJ1 428 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 PIPOXQ9P0Z9 390 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 METTL1Q9UBP6 276 aaKnown RBP3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 GHRLQ9UBU3 117 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF580Q9UK33 172 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 FOXA2Q9Y261 457 aaPredicted RBP3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 WASHC3Q9Y3C0 194 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 LRRC42Q9Y546 428 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 HUWE1Q7Z6Z7 4374 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 KMT2CQ8NEZ4 4911 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 A0A075B6Q4 140 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 OR5H14A6NHG9 310 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 SRRM4A7MD48 611 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 J3QRK9 145 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 M0R1X1 148 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 SLC22A1O15245 554 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 SLC25A17O43808 307 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 CNIH1O95406 144 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 CA2P00918 260 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 TRGV3P03979 118 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 LGALS1P09382 135 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 UCHL1P09936 223 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 GSTT2P0CG29 244 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 GSTT2BP0CG30 244 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 UBBP0CG47 229 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 ARSBP15848 533 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 ZBTB25P24278 435 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 MC5RP33032 325 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 MAP2K4P45985 399 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 TPPP2P59282 170 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 RPS25P62851 125 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 TMEM267Q0VDI3 215 aaPredicted RBP3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 MOGAT2Q3SYC2 334 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 AKIRIN2Q53H80 203 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 IGSF11Q5DX21 431 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 LY6G6FQ5SQ64 297 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 CASC10Q5T4H9 136 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 ZFAND6Q6FIF0 208 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF562Q6V9R5 426 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM89BQ8N5H3 189 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 MS4A15Q8N5U1 240 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 PACRGLQ8N7B6 248 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 GRPEL2Q8TAA5 225 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 MUC7Q8TAX7 377 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 MAFIPQ8WZ33 124 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 PHYHIPQ92561 330 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 RCHY1Q96PM5 261 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 OR4C12Q96R67 309 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 CMSS1Q9BQ75 279 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 ELOVL1Q9BW60 279 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 MND1Q9BWT6 205 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 PECRQ9BY49 303 aa3.59□□□□□ -1.83
GTF3C3-208ENST00000455546 GHITMQ9H3K2 345 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms