RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TRBV5-7A0A0A0MS05 114 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 IGHV3-72A0A0B4J1Y9 119 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 SMIM30A4D0T7 59 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 CBY3A6NI87 242 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF850A8MQ14 1090 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 TSTD3H0UI37 97 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 BLOC1S5-TXNDC5H3BN57 136 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 BUB1B-PAK6H3BSN5 160 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 K7EP13 123 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 COPEO14579 308 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 SOX15O60248 233 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 HPGDSO60760 199 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 KHDRBS3O75525 346 aaKnown RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 CPSF4O95639 269 aaKnown RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 RENP00797 406 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 CSTBP04080 98 aaKnown RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 HTR1AP08908 422 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 NBEAP1P0C6P0 100 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 PVALBP20472 110 aaPredicted RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 DCTDP32321 178 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 TNFSF8P32971 234 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 MAGEA2P43356 314 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 HNRNPA3P51991 378 aaKnown RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 RGS8P57771 180 aaPredicted RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 SNRPEP62304 92 aaKnown RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 RAP1AP62834 184 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 TATDN3Q17R31 274 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 C5orf64Q2M2E5 130 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 C12orf74Q32Q52 190 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 GLYATL3Q5SZD4 288 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 PRAMEF5Q5TYX0 476 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 NXNL2Q5VZ03 156 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 ATRAIDQ6UW56 229 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 ZFP82Q8N141 532 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 CCDC54Q8NEL0 328 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 BPIFB6Q8NFQ5 453 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 OR8J3Q8NGG0 315 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 OR52B4Q8NGK2 314 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 OR2K2Q8NGT1 345 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 CYGBQ8WWM9 190 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 CACNG8Q8WXS5 425 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 SLAMF9Q96A28 289 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF488Q96MN9 340 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 FMO2Q99518 471 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 APOL4Q9BPW4 351 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 HOPXQ9BPY8 73 aaPredicted RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF426Q9BUY5 554 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 ANKRD60Q9BZ19 345 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 TRIM31Q9BZY9 425 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 CSTL1Q9H114 145 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 WDR55Q9H6Y2 383 aaPredicted RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF430Q9H8G1 570 aaPredicted RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 SLC25A19Q9HC21 320 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 Q9N2K0 584 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 PNRC2Q9NPJ4 139 aaKnown RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 LIN7CQ9NUP9 197 aaKnown RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 OR6C3Q9NZP0 311 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 METTL1Q9UBP6 276 aaKnown RBP3.45□□□□□ -1.86
SDCBP-205ENST00000447267 RIMS3Q9UJD0 308 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 DNAJC15Q9Y5T4 150 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 NACAE9PAV3 2078 aa3.45□□□□□ -1.86
SDCBP-205ENST00000447267 DNAH8Q96JB1 4490 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 PRSS51A0A1B0GVH4 220 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 GAGE12JA6NER3 117 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 H7C1C5 153 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 TPST1O60507 370 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 METTL15P1P0C7V9 234 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 OR5H8P0DN80 308 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 MYL2P10916 166 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 FOLR2P14207 255 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 GLRA1P23415 457 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 HLA-DMAP28067 261 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 C21orf33P30042 268 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 S100A7P31151 101 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 GUCA1AP43080 201 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 CRISP3P54108 245 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 RAP1BP61224 184 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 LSM6P62312 80 aaKnown RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 LCN6P62502 163 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 RPL36AP83881 106 aaKnown RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 IRF3Q14653 427 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 GUK1Q16774 197 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 FAM74A1Q5RGS3 127 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 OR8G2PQ6IF36 304 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 HAGHLQ6PII5 290 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 ASCL4Q6XD76 172 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 RASSF6Q6ZTQ3 369 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 PRSS48Q7RTY5 328 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 ANGPTL5Q86XS5 388 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 Q8N6K4 173 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 YIPF7Q8N8F6 280 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 GDPD1Q8N9F7 314 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 OR10H4Q8NGA5 316 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 OR52J3Q8NH60 311 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 SETD6Q8TBK2 473 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 RRNAD1Q96FB5 475 aaKnown RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 CPNE2Q96FN4 548 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 HYLS1Q96M11 299 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 RBP7Q96R05 134 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 CNN2Q99439 309 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms