RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 NDUFB6O95139 128 aa16.49■□□□□ 0.23
C4orf48-202ENST00000409860 IGKV1-16P04430 117 aa16.49■□□□□ 0.23
C4orf48-202ENST00000409860 FBLN7Q53RD9 439 aa16.49■□□□□ 0.23
C4orf48-202ENST00000409860 SPAG16Q8N0X2 631 aa16.49■□□□□ 0.23
C4orf48-202ENST00000409860 TCTEX1D1Q8N7M0 179 aa16.49■□□□□ 0.23
C4orf48-202ENST00000409860 OR8H1Q8NGG4 311 aa16.49■□□□□ 0.23
C4orf48-202ENST00000409860 CD300LFQ8TDQ1 290 aa16.49■□□□□ 0.23
C4orf48-202ENST00000409860 RTBDNQ9BSG5 229 aaPredicted RBP16.49■□□□□ 0.23
C4orf48-202ENST00000409860 C1RLQ9NZP8 487 aa16.49■□□□□ 0.23
C4orf48-202ENST00000409860 MOB4Q9Y3A3 225 aa16.49■□□□□ 0.23
C4orf48-202ENST00000409860 CHST1O43916 411 aa16.48■□□□□ 0.23
C4orf48-202ENST00000409860 CRYZL1O95825 349 aa16.48■□□□□ 0.23
C4orf48-202ENST00000409860 F2RP25116 425 aa16.48■□□□□ 0.23
C4orf48-202ENST00000409860 RPL15P61313 204 aaKnown RBP16.48■□□□□ 0.23
C4orf48-202ENST00000409860 RPS16P62249 146 aaKnown RBP16.48■□□□□ 0.23
C4orf48-202ENST00000409860 MMDQ15546 238 aa16.48■□□□□ 0.23
C4orf48-202ENST00000409860 RBMXL1Q96E39 390 aaKnown RBP16.48■□□□□ 0.23
C4orf48-202ENST00000409860 TSNAXQ99598 290 aaKnown RBP16.48■□□□□ 0.23
C4orf48-202ENST00000409860 JMJD1CQ15652 2540 aa16.48■□□□□ 0.23
C4orf48-202ENST00000409860 FAM240BA0A1B0GVZ2 78 aa16.47■□□□□ 0.23
C4orf48-202ENST00000409860 NCBP2LA6PVI3 153 aaKnown RBP16.47■□□□□ 0.23
C4orf48-202ENST00000409860 M0QZK8 103 aa16.47■□□□□ 0.23
C4orf48-202ENST00000409860 SHOXO15266 292 aa16.47■□□□□ 0.23
C4orf48-202ENST00000409860 RBFOX2O43251 390 aaKnown RBP eCLIP16.47■□□□□ 0.23
C4orf48-202ENST00000409860 CRYBA1P05813 215 aa16.47■□□□□ 0.23
C4orf48-202ENST00000409860 TMEM177Q53S58 311 aa16.47■□□□□ 0.23
C4orf48-202ENST00000409860 TMED4Q7Z7H5 227 aa16.47■□□□□ 0.23
C4orf48-202ENST00000409860 OSR1Q8TAX0 266 aaPredicted RBP16.47■□□□□ 0.23
C4orf48-202ENST00000409860 ZFAND2BQ8WV99 257 aa16.47■□□□□ 0.23
C4orf48-202ENST00000409860 HARBI1Q96MB7 349 aa16.47■□□□□ 0.23
C4orf48-202ENST00000409860 PALMDQ9NP74 551 aa16.47■□□□□ 0.23
C4orf48-202ENST00000409860 TEX13DA0A0J9YY54 714 aaPredicted RBP16.46■□□□□ 0.23
C4orf48-202ENST00000409860 FAM181BA6NEQ2 426 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 NBR2O15453 112 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 PEX14O75381 377 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 SLC6A1P30531 599 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 LGALS7P47929 136 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 C11orf88Q6PI97 169 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 ENKURQ8TC29 256 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 NPFFR1Q9GZQ6 430 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 NAA60Q9H7X0 242 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 FAM212BQ9NTI7 297 aaPredicted RBP16.46■□□□□ 0.23
C4orf48-202ENST00000409860 KIAA1456Q9P272 454 aa16.46■□□□□ 0.23
C4orf48-202ENST00000409860 H0Y980 276 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 FGF16O43320 207 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 RAMP3O60896 148 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 B3GALNT1O75752 331 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 SPDEFO95238 335 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 BRWD1-AS2P59051 145 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 TAS2R31P59538 309 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 SRSF2Q01130 221 aaKnown RBP16.45■□□□□ 0.22
C4orf48-202ENST00000409860 PRIMA1Q86XR5 153 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 SGPP2Q8IWX5 399 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 CENPSQ8N2Z9 138 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 ADAD2Q8NCV1 583 aaKnown RBP16.45■□□□□ 0.22
C4orf48-202ENST00000409860 NPBQ8NG41 125 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 RITA1Q96K30 269 aa16.45■□□□□ 0.22
C4orf48-202ENST00000409860 NIPBLQ6KC79 2804 aaeCLIP16.44■□□□□ 0.22
C4orf48-202ENST00000409860 C3orf85A0A1B0GTC6 90 aa16.44■□□□□ 0.22
C4orf48-202ENST00000409860 CRYM-AS1A6NIL9 109 aa16.44■□□□□ 0.22
C4orf48-202ENST00000409860 HPRT1P00492 218 aa16.44■□□□□ 0.22
C4orf48-202ENST00000409860 AKR1C4P17516 323 aa16.44■□□□□ 0.22
C4orf48-202ENST00000409860 F2RL1P55085 397 aa16.44■□□□□ 0.22
C4orf48-202ENST00000409860 TMEM230Q96A57 120 aa16.44■□□□□ 0.22
C4orf48-202ENST00000409860 PLSCR3Q9NRY6 295 aa16.44■□□□□ 0.22
C4orf48-202ENST00000409860 ARPC1BO15143 372 aaKnown RBP16.43■□□□□ 0.22
C4orf48-202ENST00000409860 NDUFA3O95167 84 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 HRASP01112 189 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 TCRBP04435 133 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 SERPINE2P07093 398 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 CNTFRP26992 372 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 LPAR6P43657 344 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 DCTN2Q13561 401 aaKnown RBP16.43■□□□□ 0.22
C4orf48-202ENST00000409860 PLGLAQ15195 96 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 VMA21Q3ZAQ7 101 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 C5orf56Q8N8D9 126 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 Q8N9W7 124 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 RASL11BQ9BPW5 248 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 AIFM2Q9BRQ8 373 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 C20orf85Q9H1P6 137 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 PLEKHA2Q9HB19 425 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 COMMD9Q9P000 198 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 KCNIP3Q9Y2W7 256 aa16.43■□□□□ 0.22
C4orf48-202ENST00000409860 SETD2Q9BYW2 2564 aaPredicted RBP16.42■□□□□ 0.22
C4orf48-202ENST00000409860 RRHO14718 337 aa16.42■□□□□ 0.22
C4orf48-202ENST00000409860 S1PR2O95136 353 aa16.42■□□□□ 0.22
C4orf48-202ENST00000409860 VSIG10L2P0DP72 767 aa16.42■□□□□ 0.22
C4orf48-202ENST00000409860 PSG5Q15238 335 aa16.42■□□□□ 0.22
C4orf48-202ENST00000409860 TMEM128Q5BJH2 165 aa16.42■□□□□ 0.22
C4orf48-202ENST00000409860 TP53RKQ96S44 253 aa16.42■□□□□ 0.22
C4orf48-202ENST00000409860 RANBP3Q9H6Z4 567 aaPredicted RBP16.42■□□□□ 0.22
C4orf48-202ENST00000409860 FLVCR2Q9UPI3 526 aa16.42■□□□□ 0.22
C4orf48-202ENST00000409860 SLC25A17O43808 307 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 IGLV2-23P01705 113 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 OR5AC1P0C628 307 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 ANXA3P12429 323 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 RPA2P15927 270 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 NQO2P16083 231 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 UBE2MP61081 183 aaKnown RBP16.41■□□□□ 0.22
C4orf48-202ENST00000409860 UBE2KP61086 200 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms