RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 MLNRO43193 412 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 SOX15O60248 233 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 IGKV1D-12P01611 117 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 HSPB1P04792 205 aaKnown RBP8.6□□□□□ -1.03
COL5A1-202ENST00000371820 ACAA1P09110 424 aaPredicted RBP8.6□□□□□ -1.03
COL5A1-202ENST00000371820 GNRHRP30968 328 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 GATA4P43694 442 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 PMS2P11Q13670 270 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 MSMO1Q15800 293 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 SP6Q3SY56 376 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 MIDNQ504T8 468 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 PHLDA2Q53GA4 152 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 SPRNQ5BIV9 151 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 AKR1C8PQ5T2L2 129 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 TMEM88Q6PEY1 159 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 FIP1L1Q6UN15 594 aaKnown RBP8.6□□□□□ -1.03
COL5A1-202ENST00000371820 TBC1D26Q86UD7 250 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 FAM219AQ8IW50 185 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 SLC35G3Q8N808 338 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 SUMF2Q8NBJ7 301 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 OR2G3Q8NGZ4 309 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 NANPQ8TBE9 248 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 SCGB1C1Q8TD33 95 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 ZNF418Q8TF45 676 aaPredicted RBP8.6□□□□□ -1.03
COL5A1-202ENST00000371820 PARD6GQ9BYG4 376 aaPredicted RBP8.6□□□□□ -1.03
COL5A1-202ENST00000371820 KIAA1456Q9P272 454 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 MIOXQ9UGB7 285 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 POLDIP2Q9Y2S7 368 aa8.6□□□□□ -1.03
COL5A1-202ENST00000371820 DYSFO75923 2080 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 C5orf63A6NC05 138 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 RBFOX3A6NFN3 312 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 FAM90A26D6RGX4 464 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 K7N7A8 449 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 M0R036 132 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 KCNAB3O43448 404 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 RCC1P18754 421 aaPredicted RBP8.59□□□□□ -1.03
COL5A1-202ENST00000371820 PPT1P50897 306 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 AKR1D1P51857 326 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 SERF2P84101 59 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 SRSF3P84103 164 aaKnown RBP8.59□□□□□ -1.03
COL5A1-202ENST00000371820 PIGYQ3MUY2 71 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 KHDC3LQ587J8 217 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 MOGAT3Q86VF5 341 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 TMEM252Q8N6L7 170 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 OR10J5Q8NHC4 309 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 NEK7Q8TDX7 302 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 FAM216AQ8WUB2 273 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 SFT2D1Q8WV19 159 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 PINX1Q96BK5 328 aaKnown RBP8.59□□□□□ -1.03
COL5A1-202ENST00000371820 JMJD8Q96S16 334 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 HDHD3Q9BSH5 251 aaPredicted RBP8.59□□□□□ -1.03
COL5A1-202ENST00000371820 ADAT1Q9BUB4 502 aaKnown RBP8.59□□□□□ -1.03
COL5A1-202ENST00000371820 SMIM3Q9BZL3 60 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 C7orf69Q9H7B7 122 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 PRR13Q9NZ81 148 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 OR2W1Q9Y3N9 320 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 PPIAL4AQ9Y536 164 aa8.59□□□□□ -1.03
COL5A1-202ENST00000371820 MEX3AA1L020 520 aaKnown RBP8.58□□□□□ -1.04
COL5A1-202ENST00000371820 H0YL77 283 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 IFNA1P01562 189 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 SERPINE2P07093 398 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 SMIM6P0DI80 62 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 EPHA1P21709 976 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 F2RP25116 425 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 LMO1P25800 156 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 HAAOP46952 286 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 MEOX2P50222 304 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 GNB2P62879 340 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 HBG1P69891 147 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 HBG2P69892 147 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 LCN2P80188 198 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 NHLH2Q02577 135 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 PNRC1Q12796 327 aaPredicted RBP8.58□□□□□ -1.04
COL5A1-202ENST00000371820 ATP6V1FQ16864 119 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 ZNF880Q6PDB4 577 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 RTN4RL2Q86UN3 420 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 CBLN2Q8IUK8 224 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 H1FOOQ8IZA3 346 aaPredicted RBP8.58□□□□□ -1.04
COL5A1-202ENST00000371820 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
COL5A1-202ENST00000371820 OR8B3Q8NGG8 313 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 OR8U1Q8NH10 309 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 Q8TCH9 128 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 SECTM1Q8WVN6 248 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 NEIL1Q96FI4 390 aaPredicted RBP8.58□□□□□ -1.04
COL5A1-202ENST00000371820 OR8B2Q96RD0 313 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 P2RX4Q99571 388 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 ATP5SQ99766 215 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 PSMG3Q9BT73 122 aaPredicted RBP8.58□□□□□ -1.04
COL5A1-202ENST00000371820 SSBP3Q9BWW4 388 aaPredicted RBP8.58□□□□□ -1.04
COL5A1-202ENST00000371820 C11orf1Q9H5F2 150 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 TMEM231Q9H6L2 316 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 DCAF16Q9NXF7 216 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 POLR3KQ9Y2Y1 108 aaPredicted RBP8.58□□□□□ -1.04
COL5A1-202ENST00000371820 FAM96BQ9Y3D0 163 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 WSB1Q9Y6I7 421 aa8.58□□□□□ -1.04
COL5A1-202ENST00000371820 LOC105371242A0A075B767 164 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 AGPAT2O15120 278 aa8.57□□□□□ -1.04
COL5A1-202ENST00000371820 PGLYRP1O75594 196 aaPredicted RBP8.57□□□□□ -1.04
COL5A1-202ENST00000371820 CYB5R3P00387 301 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms