RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 RTN4RL2Q86UN3 420 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 MRPL13Q9BYD1 178 aaKnown RBP13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 LRP5O75197 1615 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 MARCH11A6NNE9 402 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 C9JCJ5 164 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 UBE2V2Q15819 145 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 TMEM183AQ8IXX5 376 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 OR11H7Q8NGC8 314 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 DNASE2BQ8WZ79 361 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 IL4P05112 153 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 MUC1P15941 1255 aaPredicted RBP13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 CXCL3P19876 107 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 ACSF3Q4G176 576 aaPredicted RBP13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 TAF15Q92804 592 aaKnown RBP eCLIP13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 GPR146Q96CH1 333 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 ALX4Q9H161 411 aaPredicted RBP13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 FOXI3A8MTJ6 420 aaPredicted RBP13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 PRSS23O95084 383 aa13.45□□□□□ -0.26
NUCKS1-201ENST00000367142 LEPROTL1O95214 131 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 SNAI3Q3KNW1 292 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 SAPCD1Q5SSQ6 148 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 TMEM91Q6ZNR0 172 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 TMEM106BQ9NUM4 274 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 MRPS18AQ9NVS2 196 aaKnown RBP13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 HTN3P15516 51 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 PKIAP61925 76 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 CYB561D1Q8N8Q1 229 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 PRELID3AQ96N28 172 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 KLK15Q9H2R5 256 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 KCNK7Q9Y2U2 307 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 VSIG10L2P0DP72 767 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 MBNL2Q5VZF2 373 aaKnown RBP13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 ASIPP42127 132 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 TIMM23BQ5SRD1 257 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 C2orf88Q9BSF0 95 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 NHSL1Q5SYE7 1610 aa13.44□□□□□ -0.26
NUCKS1-201ENST00000367142 LNP1A1A4G5 178 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 FBLL1A6NHQ2 334 aaKnown RBP13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 IRF3Q14653 427 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 CFAP161Q6P656 301 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 AQP10Q96PS8 301 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 NEU1Q99519 415 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 WNT5BQ9H1J7 359 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 ABLIM2Q6H8Q1 611 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 TRBV5-3A0A0A0MS03 114 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 ATP5IP56385 69 aaPredicted RBP13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 Q6ZT83 130 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 C9orf62Q8N4C0 152 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 A0A1W2PQM1 296 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 A0A1W2PRX2 142 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 TNFRSF9Q07011 255 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 PMCHL1Q16048 86 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 TMEM74BQ9NUR3 256 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 GLIPR1P48060 266 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 KCNE5Q9UJ90 142 aa13.43□□□□□ -0.26
NUCKS1-201ENST00000367142 LAMA4Q16363 1823 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 MEF2BQ02080 365 aaPredicted RBP13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 FDCSPQ8NFU4 85 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 OR10AG1Q8NH19 301 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 CLDND2Q8NHS1 167 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 ECM29Q5VYK3 1845 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 C7orf71A4D174 169 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 SMIM6P0DI80 62 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 ARL14EPLP0DKL9 152 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 SPATA45Q537H7 98 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 TCF19Q9Y242 345 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 TRBV20OR9-2A0A075B6H5 130 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 CEACAM1P13688 526 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 OR4D5Q8NGN0 318 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 HSPB9Q9BQS6 159 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 ZG16O60844 167 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 PPP1R27Q86WC6 154 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 SPSB4Q96A44 273 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 SCARF2Q96GP6 870 aaPredicted RBP13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 TRBV5-5A0A0J9YX44 114 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 RECKO95980 971 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 TGFAP01135 160 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 HSPB1P04792 205 aaKnown RBP13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 C1orf162Q8NEQ5 155 aaPredicted RBP13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 DPH3P1Q9H4G8 78 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 C7orf69Q9H7B7 122 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 DPM3Q9P2X0 92 aa13.42□□□□□ -0.26
NUCKS1-201ENST00000367142 IFI6P09912 130 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 PEAR1Q5VY43 1037 aaPredicted RBP13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 TMEM54Q969K7 222 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 LINC01587Q99440 93 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 H3BRM9 83 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 HKR1P10072 659 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 VDAC2P45880 294 aaPredicted RBP13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 GOLT1AQ6ZVE7 132 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 GP6Q9HCN6 339 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 IGLV1-36A0A0B4J1U3 117 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 IGHV3-23P01764 117 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 SIGIRRQ6IA17 410 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 C1QTNF12Q5T7M4 302 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 SPRED2Q7Z698 418 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 LINC00469Q8N7U9 141 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 MEGF10Q96KG7 1140 aa13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 MRPL18Q9H0U6 180 aaKnown RBP13.41□□□□□ -0.26
NUCKS1-201ENST00000367142 GAGE10A6NGK3 116 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 410.7 ms