RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ZNF787Q6DD87 383 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 ZNF565Q8N9K5 539 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 OR52L2PQ8NGH6 319 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 EDARADDQ8WWZ3 215 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 CORO2AQ92828 525 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 MOB3AQ96BX8 217 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 SCRT1Q9BWW7 348 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 KCNIP1Q9NZI2 227 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 ASH1LQ9NR48 2969 aaKnown RBP12.1□□□□□ -0.47
CXCL12-201ENST00000343575 MED13LQ71F56 2210 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 POLQO75417 2590 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 FASNP49327 2511 aaKnown RBP12.1□□□□□ -0.47
CXCL12-201ENST00000343575 A0A1W2PPE3 182 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 DIRAS3O95661 229 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 S100A2P29034 98 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 CDX1P47902 265 aaPredicted RBP12.1□□□□□ -0.47
CXCL12-201ENST00000343575 GNMTQ14749 295 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 LRRC10Q5BKY1 277 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 TMEM200BQ69YZ2 307 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 OR10J5Q8NHC4 309 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 GALMQ96C23 342 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 TIMD4Q96H15 378 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 LINC00574Q9H8X3 128 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
CXCL12-201ENST00000343575 GCN1Q92616 2671 aaKnown RBP12.1□□□□□ -0.47
CXCL12-201ENST00000343575 ARHGAP32A7KAX9 2087 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 A0A087WWC5 75 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 MMP23AO75900 390 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 OMGP23515 440 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 GPR6P46095 362 aaPredicted RBP12.09□□□□□ -0.47
CXCL12-201ENST00000343575 LOXL3P58215 753 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 FXYD4P59646 89 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 ERVFRD-1P60508 538 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 RPL31P62899 125 aaKnown RBP12.09□□□□□ -0.47
CXCL12-201ENST00000343575 CALYQ9NYX4 217 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 KCNIP3Q9Y2W7 256 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 ABCA12Q86UK0 2595 aa12.09□□□□□ -0.47
CXCL12-201ENST00000343575 KBTBD11-OT1A0A1B0GTJ5 212 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 CXorf65A6NEN9 183 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 CRYM-AS1A6NIL9 109 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 F2RL2O00254 374 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 PAX1P15863 534 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 OR2B11Q5JQS5 317 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 HEPN1Q6WQI6 88 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 ETV3LQ6ZN32 361 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 FAM24BQ8N5W8 94 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 BPESC1Q9GZL8 116 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 PATZ1Q9HBE1 687 aaKnown RBP12.08□□□□□ -0.48
CXCL12-201ENST00000343575 CLN8Q9UBY8 286 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 OR2W1Q9Y3N9 320 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 LINC00312Q9Y6C7 94 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 YLPM1P49750 1951 aaKnown RBP12.08□□□□□ -0.48
CXCL12-201ENST00000343575 TRGV10A0A0A0MS01 117 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 IGHV3-43A0A0B4J1X8 118 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 hCG_1809904A0A1W2PP81 198 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 A0A1W2PR64 198 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 A0A1W2PRV1 198 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 TGOLN2O43493 480 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 OR2C1O95371 312 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 IGHV3-43DP0DP04 118 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 IL2RGP31785 369 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 CEACAM6P40199 344 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 UCP3P55916 312 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 HTD2P86397 168 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 DEFA6Q01524 100 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 MEF2CQ06413 473 aaPredicted RBP12.08□□□□□ -0.48
CXCL12-201ENST00000343575 ZNF616Q08AN1 781 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 SOHLH1Q5JUK2 328 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 WDR25Q64LD2 544 aaPredicted RBP12.08□□□□□ -0.48
CXCL12-201ENST00000343575 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 C11orf42Q8N5U0 333 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 TOMM40LQ969M1 308 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 YPEL4Q96NS1 127 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 SIRT7Q9NRC8 400 aa12.08□□□□□ -0.48
CXCL12-201ENST00000343575 ELOA3CA0A087WX78 387 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-201ENST00000343575 hADV38S2A0JD32 116 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 IGLV2-14P01704 120 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 ZNF728P0DKX0 622 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 CCL3L1P16619 93 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 GNRHRP30968 328 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 PPP1CCP36873 323 aaKnown RBP12.07□□□□□ -0.48
CXCL12-201ENST00000343575 AKR1C3P42330 323 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 ATP5J2P56134 94 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 DLX6P56179 175 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 KIAA0141Q14154 515 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-201ENST00000343575 GGNBP1Q5YKI7 109 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 FAM219AQ8IW50 185 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 LRTM2Q8N967 370 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 OR13D1Q8NGV5 346 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 H1FXQ92522 213 aaKnown RBP12.07□□□□□ -0.48
CXCL12-201ENST00000343575 NEIL1Q96FI4 390 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-201ENST00000343575 PFDN5Q99471 154 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 SUCNR1Q9BXA5 334 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 VPS13CQ709C8 3753 aa12.07□□□□□ -0.48
CXCL12-201ENST00000343575 SEC14L6B5MCN3 397 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 SPINT2O43291 252 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 LTC4SQ16873 150 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms