RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 IGHV3-49A0A0A0MS15 119 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 ARL14EPLP0DKL9 152 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 BCL2P10415 239 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 CACNG7P62955 275 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 DPH3P1Q9H4G8 78 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 JPT1Q9UK76 154 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 PTPRZ1P23471 2315 aaPredicted RBP11.34□□□□□ -0.59
COL1A1-201ENST00000225964 SEC11BP0C7V7 166 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 TNFSF10P50591 281 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 SUMO2P61956 95 aaKnown RBP11.34□□□□□ -0.59
COL1A1-201ENST00000225964 UNC119Q13432 240 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 C10orf111Q8N326 155 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 ZNF729A6NN14 1252 aaPredicted RBP11.34□□□□□ -0.59
COL1A1-201ENST00000225964 FGFRL1Q8N441 504 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 GPR146Q96CH1 333 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 DNM1P46Q6ZS02 220 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 OR4X2Q8NGF9 303 aa11.34□□□□□ -0.59
COL1A1-201ENST00000225964 MBNL2Q5VZF2 373 aaKnown RBP11.34□□□□□ -0.59
COL1A1-201ENST00000225964 FOXD3Q9UJU5 478 aaPredicted RBP11.34□□□□□ -0.59
COL1A1-201ENST00000225964 C7orf71A4D174 169 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 SERF2P84101 59 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 KIF13BQ9NQT8 1826 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 ZG16O60844 167 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 CSRP2Q16527 193 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 CEACAM4O75871 244 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 MARVELD3Q96A59 401 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 RHOVQ96L33 236 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 TNFSF18Q9UNG2 199 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 KIAA0100Q14667 2235 aaKnown RBP11.33□□□□□ -0.6
COL1A1-201ENST00000225964 A0A1W2PQM1 296 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 FAM27E3Q08E93 113 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 FAM209AQ5JX71 171 aa11.33□□□□□ -0.6
COL1A1-201ENST00000225964 MOSP00540 346 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 TRGC1P0CF51 173 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 FSTP19883 344 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 LBHQ53QV2 105 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-201ENST00000225964 LNP1A1A4G5 178 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 IGKV1D-33P01593 117 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 IGKV1-33P01594 117 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 C1QCP02747 245 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 IL4P05112 153 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 CTSBP07858 339 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 SPATA45Q537H7 98 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 C9orf62Q8N4C0 152 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 SCARF2Q96GP6 870 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-201ENST00000225964 ALKBH7Q9BT30 221 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-201ENST00000225964 F11RQ9Y624 299 aaKnown RBP11.32□□□□□ -0.6
COL1A1-201ENST00000225964 HSPE1P61604 102 aaKnown RBP11.32□□□□□ -0.6
COL1A1-201ENST00000225964 WNT5BQ9H1J7 359 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 LHFPL6Q9Y693 200 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 DNASE2BQ8WZ79 361 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 SIGLEC12Q96PQ1 595 aa11.32□□□□□ -0.6
COL1A1-201ENST00000225964 CFDP00746 253 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 BSPH1Q075Z2 132 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 M0QZK8 103 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 GGCTO75223 188 aaKnown RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 TMEM45BQ96B21 275 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 MRPL13Q9BYD1 178 aaKnown RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 TMEM106BQ9NUM4 274 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 SIRT4Q9Y6E7 314 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 RECKO95980 971 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 FAM3BP58499 235 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 VAX1Q5SQQ9 334 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 OR51G1Q8NGK1 321 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 AMELYQ99218 206 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 CFHR5Q9BXR6 569 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 OTX1P32242 354 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 GOLT1AQ6ZVE7 132 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 TMEM54Q969K7 222 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 TNFRSF18Q9Y5U5 241 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 VDAC2P45880 294 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 NPBWR2P48146 333 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 ZNF146Q15072 292 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 TAF15Q92804 592 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 HSPB9Q9BQS6 159 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 TIAF1O95411 115 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 C8orf88P0DMB2 117 aa11.31□□□□□ -0.6
COL1A1-201ENST00000225964 NEU4Q8WWR8 484 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 BEX4Q9NWD9 120 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 COL11A1P12107 1806 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-201ENST00000225964 TNFRSF9Q07011 255 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 ZNRF1Q8ND25 227 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 LINC01587Q99440 93 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 MRPL18Q9H0U6 180 aaKnown RBP11.3□□□□□ -0.6
COL1A1-201ENST00000225964 C7orf69Q9H7B7 122 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 TGFAP01135 160 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 LINC00305Q7Z4B0 112 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 F12P00748 615 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-201ENST00000225964 PTGDSP41222 190 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 TMEM252Q8N6L7 170 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 ABHD17AQ96GS6 310 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms