RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 AKIRIN2Q53H80 203 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 TMEM91Q6ZNR0 172 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 MRPS26Q9BYN8 205 aaKnown RBP10.37□□□□□ -0.75
SNX1-214ENST00000625244 PLGRKTQ9HBL7 147 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 ZNF581Q9P0T4 197 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 GHRLQ9UBU3 117 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 LOC100506127A0A0U1RQW1 187 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 RTL8CO15255 209 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 SPRY2O43597 315 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 CDRT1O95170 752 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 UBBP0CG47 229 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 GTF2F2P13984 249 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 SERPINA2P20848 420 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 KCNJ3P48549 501 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 TATDN3Q17R31 274 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 MOGAT2Q3SYC2 334 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 SLC22A6Q4U2R8 563 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 C22orf42Q6IC83 251 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 GLIPR1L1Q6UWM5 242 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 OR10V1Q8NGI7 309 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 CCDC107Q8WV48 283 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 MRPL20Q9BYC9 149 aaKnown RBP10.36□□□□□ -0.75
SNX1-214ENST00000625244 FBXL15Q9H469 300 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 IL36GQ9NZH8 169 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 RNF150Q9ULK6 438 aa10.36□□□□□ -0.75
SNX1-214ENST00000625244 TRAV1-2A0A0B4J238 106 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 OR2A4O95047 310 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 HTR2CP28335 458 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 FGF9P31371 208 aaPredicted RBP10.35□□□□□ -0.75
SNX1-214ENST00000625244 DEFB114Q30KQ6 69 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 Q3ZCU0 254 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 ELP2Q6IA86 826 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 LRRTM1Q86UE6 522 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 OR6M1Q8NGM8 313 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 OR10K1Q8NGX5 313 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 RNF183Q96D59 192 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 MRPS24Q96EL2 167 aaKnown RBP10.35□□□□□ -0.75
SNX1-214ENST00000625244 WDR89Q96FK6 387 aaPredicted RBP10.35□□□□□ -0.75
SNX1-214ENST00000625244 DPCDQ9BVM2 203 aaPredicted RBP10.35□□□□□ -0.75
SNX1-214ENST00000625244 ZNF355PQ9NSJ1 428 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 TXNL4BQ9NX01 149 aaKnown RBP10.35□□□□□ -0.75
SNX1-214ENST00000625244 PEF1Q9UBV8 284 aaKnown RBP10.35□□□□□ -0.75
SNX1-214ENST00000625244 TP53TG1Q9Y2A0 90 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 AK6Q9Y3D8 172 aaKnown RBP10.35□□□□□ -0.75
SNX1-214ENST00000625244 V9GY05 133 aa10.35□□□□□ -0.75
SNX1-214ENST00000625244 AIREO43918 545 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 CRTAPO75718 401 aaPredicted RBP10.34□□□□□ -0.75
SNX1-214ENST00000625244 RAB3BP20337 219 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 GADD45AP24522 165 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 DEFA5Q01523 94 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 IL13RA2Q14627 380 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 RAB11BQ15907 218 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 RPEL1Q2QD12 228 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 DEFB135Q30KP9 77 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 PIGYQ3MUY2 71 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 ASCL4Q6XD76 172 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 LINC00596Q86U02 117 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 TPRA1Q86W33 373 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 TMEM217Q8N7C4 229 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 GVQW1Q8N7I0 195 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 MAPKAPK5-AS1Q8N8E1 139 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 POC5Q8NA72 575 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 SUMF2Q8NBJ7 301 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 OR51E2Q9H255 320 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 GNG12Q9UBI6 72 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 PEMTQ9UBM1 199 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 ST3GAL6Q9Y274 331 aa10.34□□□□□ -0.75
SNX1-214ENST00000625244 A0A0G2JLM5 398 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 TMEM30CPA0ZSE6 113 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 SLC17A2O00624 439 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 RRHO14718 337 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 ORC5O43913 435 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 SMIM18P0DKX4 95 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 EDN2P20800 178 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 C1orf100Q5SVJ3 147 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 Q6ZWC4 215 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 GPR141Q7Z602 305 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 DYNLRB2Q8TF09 96 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 CLCC1Q96S66 551 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 PARP12Q9H0J9 701 aaKnown RBP10.33□□□□□ -0.76
SNX1-214ENST00000625244 ZC4H2Q9NQZ6 224 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 SELENOKQ9Y6D0 94 aa10.33□□□□□ -0.76
SNX1-214ENST00000625244 MYCBP2O75592 4640 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 SLC22A1O15245 554 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 OR7C1O76099 320 aaPredicted RBP10.32□□□□□ -0.76
SNX1-214ENST00000625244 BPNT1O95861 308 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 MGMTP16455 207 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 KIR2DS2P43631 304 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 RBM11P57052 281 aaKnown RBP10.32□□□□□ -0.76
SNX1-214ENST00000625244 NANOS2P60321 138 aaKnown RBP10.32□□□□□ -0.76
SNX1-214ENST00000625244 PLGLAQ15195 96 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 MPV17LQ2QL34 196 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 NHLRC3Q5JS37 347 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 ZNF343Q6P1L6 599 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 SLC16A13Q7RTY0 426 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 ODF3L1Q8IXM7 274 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 OR5T1Q8NG75 326 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 KCNG3Q8TAE7 436 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 SPACA1Q9HBV2 294 aa10.32□□□□□ -0.76
SNX1-214ENST00000625244 APLNQ9ULZ1 77 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms