RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CDX1P47902 265 aaPredicted RBP21.3■■□□□ 1
SMAD4-213ENST00000591914 CX3CL1P78423 397 aa21.3■■□□□ 1
SMAD4-213ENST00000591914 NDPQ00604 133 aa21.3■■□□□ 1
SMAD4-213ENST00000591914 PLGLAQ15195 96 aa21.3■■□□□ 1
SMAD4-213ENST00000591914 PSG5Q15238 335 aa21.3■■□□□ 1
SMAD4-213ENST00000591914 ZNF660Q6AZW8 331 aaPredicted RBP21.3■■□□□ 1
SMAD4-213ENST00000591914 MRPL41Q8IXM3 137 aaKnown RBP21.3■■□□□ 1
SMAD4-213ENST00000591914 TSNAXQ99598 290 aaKnown RBP21.3■■□□□ 1
SMAD4-213ENST00000591914 RBM7Q9Y580 266 aaKnown RBP21.3■■□□□ 1
SMAD4-213ENST00000591914 TRAV18A0A075B6X5 111 aa21.29■■□□□ 1
SMAD4-213ENST00000591914 TRAV41A0A0B4J266 112 aa21.29■■□□□ 1
SMAD4-213ENST00000591914 FCN1O00602 326 aa21.29■■□□□ 1
SMAD4-213ENST00000591914 CRIP2P52943 208 aaPredicted RBP21.29■■□□□ 1
SMAD4-213ENST00000591914 LSM3P62310 102 aaKnown RBP21.29■■□□□ 1
SMAD4-213ENST00000591914 MYOZ3Q8TDC0 251 aa21.29■■□□□ 1
SMAD4-213ENST00000591914 FLYWCH2Q96CP2 140 aaKnown RBP21.29■■□□□ 1
SMAD4-213ENST00000591914 RCC1LQ96I51 464 aaKnown RBP21.29■■□□□ 1
SMAD4-213ENST00000591914 P2RX4Q99571 388 aa21.29■■□□□ 1
SMAD4-213ENST00000591914 SLC35D1Q9NTN3 355 aa21.29■■□□□ 1
SMAD4-213ENST00000591914 METTL1Q9UBP6 276 aaKnown RBP21.29■■□□□ 1
SMAD4-213ENST00000591914 FBXO7Q9Y3I1 522 aa21.29■■□□□ 1
SMAD4-213ENST00000591914 IGLV1-40P01703 118 aa21.28■■□□□ 1
SMAD4-213ENST00000591914 MYCNOSP40205 109 aa21.28■■□□□ 1
SMAD4-213ENST00000591914 RPS16P62249 146 aaKnown RBP21.28■■□□□ 1
SMAD4-213ENST00000591914 C19orf54Q5BKX5 351 aa21.28■■□□□ 1
SMAD4-213ENST00000591914 CNIH2Q6PI25 160 aa21.28■■□□□ 1
SMAD4-213ENST00000591914 MINDY2Q8NBR6 621 aa21.28■■□□□ 1
SMAD4-213ENST00000591914 ANXA10Q9UJ72 324 aa21.28■■□□□ 1
SMAD4-213ENST00000591914 DNAH3Q8TD57 4116 aa21.27■■□□□ 1
SMAD4-213ENST00000591914 TAGLNQ01995 201 aaKnown RBP21.27■■□□□ 1
SMAD4-213ENST00000591914 RAX2Q96IS3 184 aa21.27■■□□□ 1
SMAD4-213ENST00000591914 DIABLOQ9NR28 239 aa21.27■■□□□ 1
SMAD4-213ENST00000591914 DUS4LO95620 317 aaKnown RBP21.26■□□□□ 0.99
SMAD4-213ENST00000591914 EGR2P11161 476 aaPredicted RBP21.26■□□□□ 0.99
SMAD4-213ENST00000591914 ZNF562Q6V9R5 426 aa21.26■□□□□ 0.99
SMAD4-213ENST00000591914 FUNDC2Q9BWH2 189 aa21.26■□□□□ 0.99
SMAD4-213ENST00000591914 AUNIPQ9H7T9 357 aa21.26■□□□□ 0.99
SMAD4-213ENST00000591914 OR2W1Q9Y3N9 320 aa21.26■□□□□ 0.99
SMAD4-213ENST00000591914 TGP01266 2768 aa21.26■□□□□ 0.99
SMAD4-213ENST00000591914 HLA-DQB1P01920 261 aa21.25■□□□□ 0.99
SMAD4-213ENST00000591914 NFYAP23511 347 aaPredicted RBP21.25■□□□□ 0.99
SMAD4-213ENST00000591914 FOXB2Q5VYV0 432 aa21.25■□□□□ 0.99
SMAD4-213ENST00000591914 OR13F1Q8NGS4 319 aa21.25■□□□□ 0.99
SMAD4-213ENST00000591914 DDB2Q92466 427 aa21.25■□□□□ 0.99
SMAD4-213ENST00000591914 ADTRPQ96IZ2 230 aa21.25■□□□□ 0.99
SMAD4-213ENST00000591914 KLK15Q9H2R5 256 aa21.25■□□□□ 0.99
SMAD4-213ENST00000591914 NECAP2Q9NVZ3 263 aa21.25■□□□□ 0.99
SMAD4-213ENST00000591914 NUBP2Q9Y5Y2 271 aa21.25■□□□□ 0.99
SMAD4-213ENST00000591914 CCL24O00175 119 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 SLC25A17O43808 307 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 IGLV2-23P01705 113 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 PRB2P02812 416 aaPredicted RBP21.24■□□□□ 0.99
SMAD4-213ENST00000591914 DUTP33316 252 aaKnown RBP21.24■□□□□ 0.99
SMAD4-213ENST00000591914 LGALS7P47929 136 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 LUMP51884 338 aaPredicted RBP21.24■□□□□ 0.99
SMAD4-213ENST00000591914 KIAA0141Q14154 515 aaPredicted RBP21.24■□□□□ 0.99
SMAD4-213ENST00000591914 TMEM65Q6PI78 240 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 REC114Q7Z4M0 266 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 ZNF645Q8N7E2 425 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 C4orf3Q8WVX3 66 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 SLC25A46Q96AG3 418 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 DUX3Q96PT4 197 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 CLCC1Q96S66 551 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 TPSG1Q9NRR2 321 aa21.24■□□□□ 0.99
SMAD4-213ENST00000591914 CA2P00918 260 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 SMIM18P0DKX4 95 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 RRASP10301 218 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 RTL8BQ17RB0 113 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 ECSCRQ19T08 205 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 DEFB136Q30KP8 78 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 TMEM177Q53S58 311 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 UBE2NLQ5JXB2 153 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 HOGA1Q86XE5 327 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 GVQW1Q8N7I0 195 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 TCTEX1D1Q8N7M0 179 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 BVESQ8NE79 360 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 BEST4Q8NFU0 473 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 UBE2E2Q96LR5 201 aa21.23■□□□□ 0.99
SMAD4-213ENST00000591914 LINC00473A8K010 186 aa21.22■□□□□ 0.99
SMAD4-213ENST00000591914 XRCC3O43542 346 aa21.22■□□□□ 0.99
SMAD4-213ENST00000591914 SOX15O60248 233 aa21.22■□□□□ 0.99
SMAD4-213ENST00000591914 TUSC2O75896 110 aa21.22■□□□□ 0.99
SMAD4-213ENST00000591914 NCS1P62166 190 aa21.22■□□□□ 0.99
SMAD4-213ENST00000591914 CBX3Q13185 183 aa21.22■□□□□ 0.99
SMAD4-213ENST00000591914 ZNF491Q8N8L2 437 aa21.22■□□□□ 0.99
SMAD4-213ENST00000591914 S100A16Q96FQ6 103 aaKnown RBP21.22■□□□□ 0.99
SMAD4-213ENST00000591914 HARBI1Q96MB7 349 aa21.22■□□□□ 0.99
SMAD4-213ENST00000591914 FOXA2Q9Y261 457 aaPredicted RBP21.22■□□□□ 0.99
SMAD4-213ENST00000591914 IGKV1D-13A0A0B4J2D9 117 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 J3QRK9 145 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 SLC22A5O76082 557 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 CRYGBP07316 175 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 IGKV1-13P0DP09 117 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 RAB9AP51151 201 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 TMEM267Q0VDI3 215 aaPredicted RBP21.21■□□□□ 0.99
SMAD4-213ENST00000591914 AKIRIN2Q53H80 203 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 PPP1R27Q86WC6 154 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 SAMD12Q8N8I0 201 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 ABHD5Q8WTS1 349 aa21.21■□□□□ 0.99
SMAD4-213ENST00000591914 KCTD12Q96CX2 325 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms