RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ZNF205O95201 554 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 OR5G3P0C626 314 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 TFPI2P48307 235 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 FAM78BQ5VT40 261 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 OR5AU1Q8NGC0 362 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 NEIL1Q96FI4 390 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 RNF2Q99496 336 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 PCNX2A6NKB5 2137 aa11.81□□□□□ -0.52
RABGGTA-220ENST00000560998 KLRC4-KLRK1H3BQV0 150 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 TMPRSS2O15393 492 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 PDCD6O75340 191 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 C3AR1Q16581 482 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 PRSS8Q16651 343 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 MORN2Q502X0 79 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 ATP1A1-AS1Q5TC04 95 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 OSR2Q8N2R0 312 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 APH1AQ96BI3 265 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 WDR61Q9GZS3 305 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF552Q9H707 407 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 DNAJC13O75165 2243 aa11.8□□□□□ -0.52
RABGGTA-220ENST00000560998 ARID1AO14497 2285 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 CTXND1A0A1B0GTU2 59 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF503-AS2A6NEH8 195 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 F6UZH7 168 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 NUPR1O60356 82 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 NDUFB8O95169 186 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 TMEM267Q0VDI3 215 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 MALLQ13021 153 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 MSMO1Q15800 293 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 CLEC12BQ2HXU8 276 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 PIGYQ3MUY2 71 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 SPIN3Q5JUX0 258 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 OR8G2PQ6IF36 304 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 GMPPAQ96IJ6 420 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 HSPB9Q9BQS6 159 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 ALKBH7Q9BT30 221 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 NXPH2O95156 264 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 CD46P15529 392 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 S100GP29377 79 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 CTRLP40313 264 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 RPS20P60866 119 aaKnown RBP11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 TRIP6Q15654 476 aaKnown RBP11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 TDRG1Q3Y452 100 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 LINC01551Q86U37 167 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF295-AS1Q8N0V1 137 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF738Q8NE65 137 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 OR4F5Q8NH21 305 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 FAM122AQ96E09 287 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 OR4F4Q96R69 305 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 ARHGAP21Q5T5U3 1957 aa11.79□□□□□ -0.52
RABGGTA-220ENST00000560998 KRASP01116 189 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 WNT2P09544 360 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 ADMP35318 185 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 COMPP49747 757 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 UBE2G2P60604 165 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 GCNT2Q8N0V5 402 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 VN1R17PQ8TDU5 208 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 ELOVL5Q9NYP7 299 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 C5orf49A4QMS7 147 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 KIAA1324LA8MWY0 1029 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 CCL2P13500 99 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 CCNOP22674 350 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 SUMO1P63165 101 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF818PQ6ZRF7 136 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 CALHM1Q8IU99 346 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 MCEMP1Q8IX19 187 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 C1orf174Q8IYL3 243 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 OR56B2PQ8NGI1 322 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 DYRK2Q92630 601 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 ZNF586Q9NXT0 402 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 ST3GAL6Q9Y274 331 aa11.78□□□□□ -0.52
RABGGTA-220ENST00000560998 SLC33A1O00400 549 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 ZNHIT1O43257 154 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 ARR3P36575 388 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 HNRNPA3P51991 378 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 RBM11P57052 281 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 Q0VG73 95 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 MMDQ15546 238 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 PIP4P1Q86T03 277 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 GAPTQ8N292 157 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 KLHDC1Q8N7A1 406 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 STPG4Q8N801 248 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 ZNF611Q8N823 705 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 OR5P3Q8WZ94 311 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 TAF15Q92804 592 aaKnown RBP eCLIP11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 APOBEC3DQ96AK3 386 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 DEFB127Q9H1M4 99 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 ZDHHC11Q9H8X9 412 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 PATZ1Q9HBE1 687 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 CRIM1Q9NZV1 1036 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 COX11Q9Y6N1 276 aa11.77□□□□□ -0.53
RABGGTA-220ENST00000560998 PDE6DO43924 150 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 CRISP2P16562 243 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 BMP5P22003 454 aa11.76□□□□□ -0.53
RABGGTA-220ENST00000560998 CDKN1AP38936 164 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms