RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ELOVL1Q9BW60 279 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 CLEC7AQ9BXN2 247 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 OR2S2Q9NQN1 319 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 GNG12Q9UBI6 72 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 KLK11Q9UBX7 282 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF230Q9UIE0 474 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-213ENST00000550629 AMMECR1Q9Y4X0 333 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-213ENST00000550629 MALRD1Q5VYJ5 2156 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 ABCA2Q9BZC7 2435 aa4.65□□□□□ -1.67
SCAF11-213ENST00000550629 NSD1Q96L73 2696 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-213ENST00000550629 AKAP9Q99996 3911 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 IGKV1D-8A0A087WSZ0 117 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 IGHV2-26A0A0B4J1V2 119 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 IGHV1-69DA0A0B4J2H0 117 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 CENPVL3A0A0U1RRI6 287 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 ANKRD20A5PA0PJZ0 165 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 ODF3BA8MYP8 253 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 OOSP1A8MZH6 123 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 RNASEK-C17orf49H0YIS7 233 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 TOR1AO14656 332 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 BET1O15155 118 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 HSPA12AO43301 675 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 MMP23AO75900 390 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 SLC22A5O76082 557 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 LY6G6DO95868 133 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 IGLV1-47P01700 117 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 IGHV1-69P01742 117 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 GSTT2P0CG29 244 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 OR5H8P0DN80 308 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 IL7P13232 177 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 OMGP23515 440 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 NFYBP25208 207 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 FAUP35544 74 aaKnown RBP4.64□□□□□ -1.67
SCAF11-213ENST00000550629 CEACAM3P40198 252 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 CEACAM6P40199 344 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF137PP52743 207 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 HERPUD1Q15011 391 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 CDK10Q15131 360 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 MSMO1Q15800 293 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 MORN2Q502X0 79 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 IGSF11Q5DX21 431 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 RNASE10Q5GAN6 216 aaKnown RBP4.64□□□□□ -1.67
SCAF11-213ENST00000550629 FAM120AOSQ5T036 256 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 MINOS1Q5TGZ0 78 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 GPR157Q5UAW9 335 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 TRIQKQ629K1 86 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 HCP5Q6MZN7 132 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 STEAP1BQ6NZ63 245 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 SLC25A48Q6ZT89 311 aaKnown RBP4.64□□□□□ -1.67
SCAF11-213ENST00000550629 TMEM17Q86X19 198 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 H1FOOQ8IZA3 346 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-213ENST00000550629 GVQW1Q8N7I0 195 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF439Q8NDP4 499 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 OR2AK2Q8NG84 335 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 GIMAP1Q8WWP7 306 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 BORCS5Q969J3 196 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 GINS4Q9BRT9 223 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 SUCNR1Q9BXA5 334 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 YAE1D1Q9NRH1 226 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 NUP50Q9UKX7 468 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 PSG11Q9UQ72 335 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 OR2W1Q9Y3N9 320 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 TBL2Q9Y4P3 447 aaKnown RBP4.64□□□□□ -1.67
SCAF11-213ENST00000550629 MINOS1-NBL1R4GNA1 71 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.64□□□□□ -1.671e-38■■■■■ 50.6
SCAF11-213ENST00000550629 MXRA5Q9NR99 2828 aa4.64□□□□□ -1.67
SCAF11-213ENST00000550629 CR1P17927 2039 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 MEX3AA1L020 520 aaKnown RBP4.63□□□□□ -1.67
SCAF11-213ENST00000550629 MEIS3P1A6NDR6 274 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 NAP1L6A6NFF2 107 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 LEUTXA8MZ59 168 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 LY6LH3BQJ8 138 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 J3QR06 171 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 NPFFO15130 113 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 TXNL1O43396 289 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 RAB3DO95716 219 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 CD3DP04234 171 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 IFNA6P05013 189 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 FGF2P09038 288 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 AKAIN1P0CW23 69 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 IL3RAP26951 378 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 HLA-DMAP28067 261 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 HTR1DP28221 377 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 HRH1P35367 487 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 PPP1CCP36873 323 aaKnown RBP4.63□□□□□ -1.67
SCAF11-213ENST00000550629 INPP1P49441 399 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 ARHGDIBP52566 201 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 MADCAM1Q13477 382 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 GNMTQ14749 295 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 SURF2Q15527 256 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-213ENST00000550629 AANATQ16613 207 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 CT45A1Q5HYN5 189 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 KLF17Q5JT82 389 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF660Q6AZW8 331 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-213ENST00000550629 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 FAM71F2Q6NXP2 309 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 LPCAT3Q6P1A2 487 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 PNKDQ8N490 385 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms