RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SELENOHQ8IZQ5 122 aaKnown RBP12.72□□□□□ -0.37
USP47-207ENST00000527733 NDFIP1Q9BT67 221 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 SLC25A22Q9H936 323 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 USF3Q68DE3 2245 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 ZNF785A8K8V0 405 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 RNASEK-C17orf49H0YIS7 233 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 HNF1AP20823 631 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 LRP11Q86VZ4 500 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 FAM222BQ8WU58 562 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 C5orf63A6NC05 138 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 UQCC3Q6UW78 93 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 TMEM252Q8N6L7 170 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 SLC24A4Q8NFF2 622 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 OR4F17Q8NGA8 305 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 MRPL30Q8TCC3 161 aaKnown RBP12.72□□□□□ -0.37
USP47-207ENST00000527733 GINS3Q9BRX5 216 aa12.72□□□□□ -0.37
USP47-207ENST00000527733 IGKV1-12A0A0C4DH73 117 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 KBTBD11-OT1A0A1B0GTJ5 212 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 MARCH11A6NNE9 402 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 DVL1O14640 695 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 IGKV1D-12P01611 117 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 IGHV1-46P01743 117 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 ZP1P60852 638 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 CXorf66Q5JRM2 361 aaPredicted RBP12.71□□□□□ -0.37
USP47-207ENST00000527733 PNKDQ8N490 385 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 FBP1P09467 338 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 WT1P19544 449 aaPredicted RBP12.71□□□□□ -0.37
USP47-207ENST00000527733 ORM2P19652 201 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 GNLYP22749 145 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 DOK5Q9P104 306 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 CACNA1AO00555 2505 aa12.71□□□□□ -0.37
USP47-207ENST00000527733 FAM90A26D6RGX4 464 aa12.71□□□□□ -0.38
USP47-207ENST00000527733 CDKN1AP38936 164 aa12.71□□□□□ -0.38
USP47-207ENST00000527733 TMEM187Q14656 261 aa12.71□□□□□ -0.38
USP47-207ENST00000527733 PRR30Q53SZ7 412 aaPredicted RBP12.71□□□□□ -0.38
USP47-207ENST00000527733 TEX29Q8N6K0 151 aa12.71□□□□□ -0.38
USP47-207ENST00000527733 OR4C13Q8NGP0 309 aa12.71□□□□□ -0.38
USP47-207ENST00000527733 PLPPR1Q8TBJ4 325 aa12.71□□□□□ -0.38
USP47-207ENST00000527733 OR10C1Q96KK4 312 aa12.71□□□□□ -0.38
USP47-207ENST00000527733 RNF2Q99496 336 aa12.71□□□□□ -0.38
USP47-207ENST00000527733 DEDDO75618 318 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 APELAP0DMC3 54 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 CNN1P51911 297 aaKnown RBP12.7□□□□□ -0.38
USP47-207ENST00000527733 ZGRF1Q86YA3 2104 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 DCTN5Q9BTE1 182 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 TPPP3Q9BW30 176 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 TMEM140Q9NV12 185 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 OR5AC2Q9NZP5 309 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 MED19A0JLT2 244 aaPredicted RBP12.7□□□□□ -0.38
USP47-207ENST00000527733 RAB19A4D1S5 217 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 PTBP3O95758 552 aaKnown RBP12.7□□□□□ -0.38
USP47-207ENST00000527733 FAM169BQ8N8A8 192 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 NKX6-2Q9C056 277 aaPredicted RBP12.7□□□□□ -0.38
USP47-207ENST00000527733 AAMDCQ9H7C9 122 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 METTL1Q9UBP6 276 aaKnown RBP12.7□□□□□ -0.38
USP47-207ENST00000527733 LINC00312Q9Y6C7 94 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 WSB1Q9Y6I7 421 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 FAM208BQ5VWN6 2430 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 FER1L5A0AVI2 2057 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 C1QTNF9BB2RNN3 333 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 C1QTNF9P0C862 333 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 S100A12P80511 92 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 AANATQ16613 207 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 SSMEM1Q8WWF3 244 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 LSM10Q969L4 123 aaKnown RBP12.7□□□□□ -0.38
USP47-207ENST00000527733 URGCP-MRPS24S4R325 110 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 ACACBO00763 2458 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 SLC25A17O43808 307 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 S1PR2O95136 353 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 LYZP61626 148 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 NHLH2Q02577 135 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 TMEM42Q69YG0 159 aa12.7□□□□□ -0.38
USP47-207ENST00000527733 H1FOOQ8IZA3 346 aaPredicted RBP12.7□□□□□ -0.38
USP47-207ENST00000527733 SSBP3Q9BWW4 388 aaPredicted RBP12.7□□□□□ -0.38
USP47-207ENST00000527733 SAV1Q9H4B6 383 aaPredicted RBP12.7□□□□□ -0.38
USP47-207ENST00000527733 TEPPQ6URK8 271 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 DHRS11Q6UWP2 260 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 ZFP82Q8N141 532 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 WDR31Q8NA23 367 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 FAM168AQ92567 244 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 TRAF4Q9BUZ4 470 aaPredicted RBP12.69□□□□□ -0.38
USP47-207ENST00000527733 CHODLQ9H9P2 273 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 TRAV24A0A0B4J272 114 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 IGKV3-15P01624 115 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 H2BFSP57053 126 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 HSPE1P61604 102 aaKnown RBP12.69□□□□□ -0.38
USP47-207ENST00000527733 ARL16Q0P5N6 197 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 ECSCRQ19T08 205 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 SPRY4Q9C004 299 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 COL4A3Q01955 1670 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 SEC11BP0C7V7 166 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 USF1P22415 310 aaPredicted RBP12.69□□□□□ -0.38
USP47-207ENST00000527733 DVL1P1P54792 670 aaPredicted RBP12.69□□□□□ -0.38
USP47-207ENST00000527733 GALNT14Q96FL9 552 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 TP53BP1Q12888 1972 aaPredicted RBP12.69□□□□□ -0.38
USP47-207ENST00000527733 SRRM5B3KS81 715 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 OR2A4O95047 310 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 RNF138Q8WVD3 245 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 GRAMD2BQ96HH9 432 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 OR2A7Q96R45 310 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms