RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ZNF701M0R085 212 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 RRHO14718 337 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 SHOXO15266 292 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 ACTL6BO94805 426 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 PPYP01298 95 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 IGHG2P01859 326 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 HLA-DQB1P01920 261 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 PMP2P02689 132 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 AMY1AP04745 511 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 AMY2AP04746 511 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 CSF1P09603 554 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 PTHLHP12272 177 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 TBPP20226 339 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 AADACP22760 399 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 HLA-DMAP28067 261 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 CD40LGP29965 261 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 HRH1P35367 487 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 KIR2DS2P43631 304 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 LGALS7P47929 136 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 IL18Q14116 193 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 MSMO1Q15800 293 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 C5orf64Q2M2E5 130 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 TMEM95Q3KNT9 176 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 VMA21Q3ZAQ7 101 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 RNASE12Q5GAN4 147 aaKnown RBP4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 RNASE10Q5GAN6 216 aaKnown RBP4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 PYHIN1Q6K0P9 492 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 LIN54Q6MZP7 749 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 LPCAT3Q6P1A2 487 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF66Q6ZN08 573 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 NDUFA11Q86Y39 141 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 LAX1Q8IWV1 398 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 CMTM1Q8IZ96 169 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 COMMD1Q8N668 190 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 C11orf44Q8N8P7 122 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 Q8N9W7 124 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF383Q8NA42 475 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZBTB34Q8NCN2 500 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 BVESQ8NE79 360 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR5AU1Q8NGC0 362 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR4S2Q8NH73 311 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 GPX8Q8TED1 209 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 TCTEX1D2Q8WW35 142 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 GIMAP1Q8WWP7 306 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 SNAPC3Q92966 411 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 HARBI1Q96MB7 349 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 AIFM2Q9BRQ8 373 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 PARP11Q9NR21 331 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 TAS2R8Q9NYW2 309 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 METTL1Q9UBP6 276 aaKnown RBP4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 RBMX2Q9Y388 322 aaKnown RBP4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 CEPT1Q9Y6K0 416 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 ANK3Q12955 4377 aaKnown RBP4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
HMGB1P40-201ENST00000525121 TCRBV4S1A1TA0A5B7 111 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 NUDT19A8MXV4 375 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 GABARAPH6UMI1 98 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 SLC25A17O43808 307 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 FCGR3BO75015 233 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 NDUFA3O95167 84 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 CNIH1O95406 144 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 CRYZL1O95825 349 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 HLA-DRB1P01911 266 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 IGKV1-16P04430 117 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 PF4V1P10720 104 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 NAT1P18440 290 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 DUTP33316 252 aaKnown RBP4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 F2RL1P55085 397 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 TAS2R19P59542 299 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 GNB1P62873 340 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 SSBP1Q04837 148 aaKnown RBP4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 SRSF4Q08170 494 aaKnown RBP4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 TMEM267Q0VDI3 215 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 DYRK1AQ13627 763 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 MEF2DQ14814 521 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 PSG5Q15238 335 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 NSUN5P1Q3KNT7 163 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 FBLN7Q53RD9 439 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR2B11Q5JQS5 317 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 CXorf66Q5JRM2 361 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 SPANXN2Q5MJ10 180 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 AADACL3Q5VUY0 350 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF660Q6AZW8 331 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 TEX38Q6PEX7 206 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 TMEM65Q6PI78 240 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 Q6ZS46 218 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 OVCH2Q7RTZ1 564 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 STPG2Q8N412 459 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 FAM71E2Q8N5Q1 922 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 TCTEX1D1Q8N7M0 179 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 NPBQ8NG41 125 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR4F17Q8NGA8 305 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 VSTM2AQ8TAG5 236 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 OSR1Q8TAX0 266 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 CD300LFQ8TDQ1 290 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR4F4Q96R69 305 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF2Q9BSG1 426 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 WNT10AQ9GZT5 417 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 MMP27Q9H306 513 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR51J1Q9H342 316 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms