RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 UFSP1Q6NVU6 142 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 KCNIP4Q6PIL6 250 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 CEACAM20Q6UY09 585 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 CEACAM19Q7Z692 300 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 CALHM3Q86XJ0 350 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 SLC35F2Q8IXU6 374 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF101Q8IZC7 436 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 DEFB106AQ8N104 65 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF567Q8N184 647 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 CA13Q8N1Q1 262 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 KRTCAP2Q8N6L1 136 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 BCORP1Q8N888 145 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF615Q8N8J6 731 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 CLEC1AQ8NC01 280 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR10V1Q8NGI7 309 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR6N2Q8NGY6 317 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR4L1Q8NH43 312 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 PPP1R1CQ8WVI7 109 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 NAT6Q93015 286 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 ESAMQ96AP7 390 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 RBMXL1Q96E39 390 aaKnown RBP3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 LINC00615Q96LM1 132 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF681Q96N22 645 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 YPEL2Q96QA6 119 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 TRIB3Q96RU7 358 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 P2RX4Q99571 388 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 NDFIP1Q9BT67 221 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 LRRC61Q9BV99 259 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 TSSK6Q9BXA6 273 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 RERGLQ9H628 205 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 GPR84Q9NQS5 396 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 SPANXB1Q9NS25 103 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 THYN1Q9P016 225 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR1A1Q9P1Q5 309 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 NOP16Q9Y3C1 178 aaKnown RBP3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 RFNGQ9Y644 331 aa3.86□□□□□ -1.79
HMGB3P13-201ENST00000511263 A0A087WV48 116 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 LOC102723996A0A087X1L8 192 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 TRAV1-2A0A0B4J238 106 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 A0A1W2PP11 408 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 A0A1W2PRE2 83 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 FABP5P3A8MUU1 101 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 TMEM178BH3BS89 294 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 CLDN5O00501 218 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 GAPDHSO14556 408 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 TAX1BP3O14907 124 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 NDUFS4O43181 175 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 PHF1O43189 567 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 SLC16A7O60669 478 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 IGLV3-25P01717 112 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 H1F0P07305 194 aaKnown RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 PTHLHP12272 177 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 PYCR1P32322 319 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 SRP14P37108 136 aaKnown RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 PAX9P55771 341 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 UBE2MP61081 183 aaKnown RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 RHOAP61586 193 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 RPS18P62269 152 aaKnown RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 SLC35B1P78383 322 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 PSG9Q00887 426 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 RUNX3Q13761 415 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 EXOSC7Q15024 291 aaKnown RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 LY6G6FQ5SQ64 297 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 UTF1Q5T230 341 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 FAM162BQ5T6X4 162 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 LYPLAL1Q5VWZ2 237 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 C12orf73Q69YU5 71 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 AMMECR1LQ6DCA0 310 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF621Q6ZSS3 439 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF534Q76KX8 674 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF429Q86V71 674 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZADH2Q8N4Q0 377 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 LINC00471Q8N535 108 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZDHHC22Q8N966 263 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF485Q8NCK3 441 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ADAD2Q8NCV1 583 aaKnown RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR2T33Q8NG76 320 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR10P1Q8NGE3 313 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR4C3Q8NH37 302 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 KIR2DL5BQ8NHK3 375 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 PTPMT1Q8WUK0 201 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 TM4SF19Q96DZ7 209 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 WDR34Q96EX3 536 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 S100A16Q96FQ6 103 aaKnown RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ADTRPQ96IZ2 230 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 OXGR1Q96P68 337 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 FEVQ99581 238 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF670Q9BS34 389 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 LMF2Q9BU23 707 aaKnown RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 PECRQ9BY49 303 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 WDR61Q9GZS3 305 aaKnown RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 PARLQ9H300 379 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 FNDC4Q9H6D8 234 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 ST20Q9HBF5 79 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 RDH14Q9HBH5 336 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 SDF2L1Q9HCN8 221 aa3.85□□□□□ -1.79
HMGB3P13-201ENST00000511263 CYTL1Q9NRR1 136 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms