RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SLC35D1Q9NTN3 355 aa11.92□□□□□ -0.5
RNF4-210ENST00000508235 IGKV1D-13A0A0B4J2D9 117 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 GABARAPH6UMI1 98 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 KCNAB3O43448 404 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 PMP2P02689 132 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 IGKV1-13P0DP09 117 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 VSIG10L2P0DP72 767 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 TBPP20226 339 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 AADACP22760 399 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 HLA-DMAP28067 261 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 HRH1P35367 487 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 F2RL1P55085 397 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 HERV-K104P61576 105 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 IL18Q14116 193 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 LYSMD2Q8IV50 215 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 FOXRED2Q8IWF2 684 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 FAM71E2Q8N5Q1 922 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 ABHD1Q96SE0 405 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 TSNAXQ99598 290 aaKnown RBP11.91□□□□□ -0.5
RNF4-210ENST00000508235 CITED1Q99966 193 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 WNT10AQ9GZT5 417 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 MTFP1Q9UDX5 166 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 RBMX2Q9Y388 322 aaKnown RBP11.91□□□□□ -0.5
RNF4-210ENST00000508235 PRELID3BQ9Y3B1 194 aa11.91□□□□□ -0.5
RNF4-210ENST00000508235 CTDSPLO15194 276 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 NDUFA3O95167 84 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 IGHG2P01859 326 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 DUTP33316 252 aaKnown RBP11.9□□□□□ -0.5
RNF4-210ENST00000508235 RFX2P48378 723 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 TSPAN5P62079 268 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 SLC35E3Q7Z769 313 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 CENPVQ7Z7K6 275 aaPredicted RBP11.9□□□□□ -0.5
RNF4-210ENST00000508235 OR6F1Q8NGZ6 308 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 OR52I2Q8NH67 350 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 SECTM1Q8WVN6 248 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 ZNF2Q9BSG1 426 aaPredicted RBP11.9□□□□□ -0.5
RNF4-210ENST00000508235 SLC5A7Q9GZV3 580 aa11.9□□□□□ -0.5
RNF4-210ENST00000508235 ZNF107Q9UII5 783 aaPredicted RBP11.9□□□□□ -0.5
RNF4-210ENST00000508235 FABP12A6NFH5 140 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 SH2D7A6NKC9 451 aaPredicted RBP11.89□□□□□ -0.51
RNF4-210ENST00000508235 RRHO14718 337 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 SPDEFO95238 335 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 TNFSF8P32971 234 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 LGALS7P47929 136 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 FXYD4P59646 89 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 RPS16P62249 146 aaKnown RBP11.89□□□□□ -0.51
RNF4-210ENST00000508235 PLGLAQ15195 96 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 RNASE12Q5GAN4 147 aaKnown RBP11.89□□□□□ -0.51
RNF4-210ENST00000508235 VAX1Q5SQQ9 334 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 ZNF660Q6AZW8 331 aaPredicted RBP11.89□□□□□ -0.51
RNF4-210ENST00000508235 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 ZNF66Q6ZN08 573 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 KCTD9Q7L273 389 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 TMEM17Q86X19 198 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 SGMS2Q8NHU3 365 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 CHPT1Q8WUD6 406 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 SMIM4Q8WVI0 70 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 DDB2Q92466 427 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 MOB3AQ96BX8 217 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 C5orf30Q96GV9 206 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 GON7Q9BXV9 100 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 TAS2R8Q9NYW2 309 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 KLK11Q9UBX7 282 aa11.89□□□□□ -0.51
RNF4-210ENST00000508235 DPPA5A6NC42 116 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 AP4M1O00189 453 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 IGLV2-14P01704 120 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 IGKV1-16P04430 117 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 IFNA6P05013 189 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 TAS2R19P59542 299 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 C5orf64Q2M2E5 130 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 TMEM95Q3KNT9 176 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 RNASE10Q5GAN6 216 aaKnown RBP11.88□□□□□ -0.51
RNF4-210ENST00000508235 LPCAT3Q6P1A2 487 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 BVESQ8NE79 360 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 RITA1Q96K30 269 aa11.88□□□□□ -0.51
RNF4-210ENST00000508235 LINC00473A8K010 186 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 SHOXO15266 292 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 FBXO24O75426 580 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 HLA-DRB1P01911 266 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 CSF1P09603 554 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 CNTFRP26992 372 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 S100GP29377 79 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 KIR2DS2P43631 304 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 LINC00205P59089 165 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 KRTAP10-3P60369 221 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 SLC35B1P78383 322 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 DGCR2P98153 550 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 CATR1Q13166 79 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 TMEM177Q53S58 311 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 CMTM1Q8IZ96 169 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 TMEM229BQ8NBD8 167 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 OSR1Q8TAX0 266 aaPredicted RBP11.87□□□□□ -0.51
RNF4-210ENST00000508235 TCTEX1D2Q8WW35 142 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 HARBI1Q96MB7 349 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 CCL28Q9NRJ3 127 aa11.87□□□□□ -0.51
RNF4-210ENST00000508235 METTL1Q9UBP6 276 aaKnown RBP11.87□□□□□ -0.51
RNF4-210ENST00000508235 TET2Q6N021 2002 aaPredicted RBP11.86□□□□□ -0.51
RNF4-210ENST00000508235 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
RNF4-210ENST00000508235 GSTZ1O43708 216 aaPredicted RBP11.86□□□□□ -0.51
RNF4-210ENST00000508235 PTBP1P26599 531 aaKnown RBP eCLIP11.86□□□□□ -0.519e-7■■■■■ 27.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms