RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	SAA2-SAA4	A0A096LPE2	208 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	LEUTX	A8MZ59	168 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	SAA2	P0DJI9	122 aa	Predicted RBP	10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	BTC	P35070	178 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	CEACAM3	P40198	252 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	REG1B	P48304	166 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	RPL39P5	Q59GN2	51 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	LDLRAD2	Q5SZI1	272 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	TPTE2P1	Q5T6R2	138 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	MINOS1	Q5TGZ0	78 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	LPCAT3	Q6P1A2	487 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	ODF3L1	Q8IXM7	274 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	MRGPRF	Q96AM1	343 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	RPE	Q96AT9	228 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	S1PR3	Q99500	378 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	GHITM	Q9H3K2	345 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	HILPDA	Q9Y5L2	63 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	MINOS1-NBL1	R4GNA1	71 aa		10.51	□□□□□ -0.73
NR1H3-223	ENST00000486991	FAM240B	A0A1B0GVZ2	78 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991		M0R1X1	148 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	SLC22A5	O76082	557 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	TSPAN15	O95858	294 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	PI3	P19957	117 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	PAX6	P26367	422 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	GNRHR	P30968	328 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	ECI1	P42126	302 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	UCP3	P55916	312 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	DIAPH2-AS1	Q14236	149 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	SSX2	Q16385	188 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	AANAT	Q16613	207 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	PHLDA2	Q53GA4	152 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	HIST2H2BD	Q6DRA6	164 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	ZNF818P	Q6ZRF7	136 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	SLC38A6	Q8IZM9	456 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	DRAM1	Q8N682	238 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	LINC01006	Q8NI28	216 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	ENKUR	Q8TC29	256 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	ZFAND1	Q8TCF1	268 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	RSRP1	Q9BUV0	290 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	RAB18	Q9NP72	206 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	SDHAF2	Q9NX18	166 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	RNF114	Q9Y508	228 aa		10.5	□□□□□ -0.73
NR1H3-223	ENST00000486991	LY6L	H3BQJ8	138 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	GPR31	O00270	319 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	TIMM23	O14925	209 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	TNFSF12	O43508	249 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	NDUFB6	O95139	128 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	GAPDH	P04406	335 aa	Known RBP	10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	SLC6A1	P30531	599 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	ZNF137P	P52743	207 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	RBMS2	Q15434	407 aa	Known RBP	10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	SURF2	Q15527	256 aa	Predicted RBP	10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	ABCA11P	Q4W5N1	156 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	PLA1A	Q53H76	456 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	ZNF833P	Q6ZTB9	187 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	TGIF2LX	Q8IUE1	241 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	CMTM1	Q8IZ96	169 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	ST6GALNAC6	Q969X2	333 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	MALSU1	Q96EH3	234 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	C5orf30	Q96GV9	206 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	AKR1E2	Q96JD6	320 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	SCGB3A2	Q96PL1	93 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	GAB2	Q9UQC2	676 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	C14orf166	Q9Y224	244 aa	Known RBP	10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991	VSIG4	Q9Y279	399 aa		10.49	□□□□□ -0.73
NR1H3-223	ENST00000486991		M0QZ24	198 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	PROP1	O75360	226 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	IGLV2-14	P01704	120 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	RLN1	P04808	185 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	CTSD	P07339	412 aa	Predicted RBP	10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	S100G	P29377	79 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	MSMO1	Q15800	293 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	FAM71F2	Q6NXP2	309 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	TMED4	Q7Z7H5	227 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	MOB3B	Q86TA1	216 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	DYNAP	Q8N1N2	210 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	DRAXIN	Q8NBI3	349 aa	Predicted RBP	10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	ZBTB34	Q8NCN2	500 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	GPHA2	Q96T91	129 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	SSX3	Q99909	188 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	ZNF251	Q9BRH9	671 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	MRPL20	Q9BYC9	149 aa	Known RBP	10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	MEGF9	Q9H1U4	602 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	C16orf95	Q9H693	158 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	GPR132	Q9UNW8	380 aa		10.48	□□□□□ -0.73
NR1H3-223	ENST00000486991	IGHV1-3	A0A0C4DH29	117 aa		10.47	□□□□□ -0.73
NR1H3-223	ENST00000486991	OOSP1	A8MZH6	123 aa		10.47	□□□□□ -0.73
NR1H3-223	ENST00000486991	TXNL1	O43396	289 aa		10.47	□□□□□ -0.73
NR1H3-223	ENST00000486991	TSPAN9	O75954	239 aa		10.47	□□□□□ -0.73
NR1H3-223	ENST00000486991	TCRB	P04435	133 aa		10.47	□□□□□ -0.73
NR1H3-223	ENST00000486991	PIGP	P57054	158 aa		10.47	□□□□□ -0.73
NR1H3-223	ENST00000486991	PROK1	P58294	105 aa		10.47	□□□□□ -0.73
NR1H3-223	ENST00000486991	LINC00205	P59089	165 aa		10.47	□□□□□ -0.73
NR1H3-223	ENST00000486991	LRRC75B	Q2VPJ9	315 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms