RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 SHISA2Q6UWI4 295 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 PDPNQ86YL7 162 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 FAM71E2Q8N5Q1 922 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 Q8N9W7 124 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 ZBTB34Q8NCN2 500 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 OR6F1Q8NGZ6 308 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 OR52I2Q8NH67 350 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 WFDC12Q8WWY7 111 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 BORCS5Q969J3 196 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 C5orf30Q96GV9 206 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 RASL11BQ9BPW5 248 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 SERTAD4Q9NUC0 356 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 LIN7CQ9NUP9 197 aaKnown RBP8.61□□□□□ -1.03
ATG4B-219ENST00000479941 ZNF107Q9UII5 783 aaPredicted RBP8.61□□□□□ -1.03
ATG4B-219ENST00000479941 SIGLEC9Q9Y336 463 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 TRRAPQ9Y4A5 3859 aa8.61□□□□□ -1.03
ATG4B-219ENST00000479941 HAX1O00165 279 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 NBR2O15453 112 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 PEX14O75381 377 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 IGLV2-14P01704 120 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 RRASP10301 218 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 TBPP20226 339 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 HERV-K104P61576 105 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 TSPAN5P62079 268 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 CBX3Q13185 183 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 RNASE12Q5GAN4 147 aaKnown RBP8.6□□□□□ -1.03
ATG4B-219ENST00000479941 C9orf152Q5JTZ5 239 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 VAX1Q5SQQ9 334 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 FOXB2Q5VYV0 432 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 ZNF660Q6AZW8 331 aaPredicted RBP8.6□□□□□ -1.03
ATG4B-219ENST00000479941 Q6ZS46 218 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 NPBQ8NG41 125 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 SMIM4Q8WVI0 70 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 SECTM1Q8WVN6 248 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 FLYWCH2Q96CP2 140 aaKnown RBP8.6□□□□□ -1.03
ATG4B-219ENST00000479941 RITA1Q96K30 269 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 SOSTQ9BQB4 213 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 ZNF2Q9BSG1 426 aaPredicted RBP8.6□□□□□ -1.03
ATG4B-219ENST00000479941 SLC35D1Q9NTN3 355 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 KIAA1456Q9P272 454 aa8.6□□□□□ -1.03
ATG4B-219ENST00000479941 RBMX2Q9Y388 322 aaKnown RBP8.6□□□□□ -1.03
ATG4B-219ENST00000479941 SH2D7A6NKC9 451 aaPredicted RBP8.59□□□□□ -1.03
ATG4B-219ENST00000479941 LINC00473A8K010 186 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 NDUFA3O95167 84 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 IGHG2P01859 326 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 IGKV1-16P04430 117 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 CSF1P09603 554 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 PTBP1P26599 531 aaKnown RBP eCLIP8.59□□□□□ -1.03
ATG4B-219ENST00000479941 LINC00205P59089 165 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 TAS2R19P59542 299 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 FXYD4P59646 89 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 RPS16P62249 146 aaKnown RBP8.59□□□□□ -1.03
ATG4B-219ENST00000479941 DGCR2P98153 550 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 RTL8BQ17RB0 113 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 ZNF66Q6ZN08 573 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 TMEM17Q86X19 198 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 ARRDC1Q8N5I2 433 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 KLHDC1Q8N7A1 406 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 TMEM229BQ8NBD8 167 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 DDB2Q92466 427 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 MOB3AQ96BX8 217 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 RBMXL1Q96E39 390 aaKnown RBP8.59□□□□□ -1.03
ATG4B-219ENST00000479941 TSNAXQ99598 290 aaKnown RBP8.59□□□□□ -1.03
ATG4B-219ENST00000479941 HSD17B10Q99714 261 aaKnown RBP8.59□□□□□ -1.03
ATG4B-219ENST00000479941 WNT10AQ9GZT5 417 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 SLC5A7Q9GZV3 580 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 CCL28Q9NRJ3 127 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 TAS2R8Q9NYW2 309 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 PRELID3BQ9Y3B1 194 aa8.59□□□□□ -1.03
ATG4B-219ENST00000479941 KCNAB3O43448 404 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 GSTZ1O43708 216 aaPredicted RBP8.58□□□□□ -1.04
ATG4B-219ENST00000479941 SPDEFO95238 335 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 HLA-DRB1P01911 266 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 CD74P04233 296 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 CD3DP04234 171 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 IFNA6P05013 189 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 VSIG10L2P0DP72 767 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 CNTFRP26992 372 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 LGALS7P47929 136 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 C5orf64Q2M2E5 130 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 TMEM95Q3KNT9 176 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 TMEM177Q53S58 311 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 RNASE10Q5GAN6 216 aaKnown RBP8.58□□□□□ -1.04
ATG4B-219ENST00000479941 LPCAT3Q6P1A2 487 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 KCTD9Q7L273 389 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 SLC35E3Q7Z769 313 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 CCDC190Q86UF4 302 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 FOXRED2Q8IWF2 684 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 MFSD4AQ8N468 514 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 BVESQ8NE79 360 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 CITED1Q99966 193 aa8.58□□□□□ -1.04
ATG4B-219ENST00000479941 M0QYG6 137 aa8.57□□□□□ -1.04
ATG4B-219ENST00000479941 AP4M1O00189 453 aa8.57□□□□□ -1.04
ATG4B-219ENST00000479941 RRHO14718 337 aa8.57□□□□□ -1.04
ATG4B-219ENST00000479941 FCGR3BO75015 233 aa8.57□□□□□ -1.04
ATG4B-219ENST00000479941 GNRHRP30968 328 aa8.57□□□□□ -1.04
ATG4B-219ENST00000479941 ETV6P41212 452 aa8.57□□□□□ -1.04
ATG4B-219ENST00000479941 KRTAP10-3P60369 221 aa8.57□□□□□ -1.04
ATG4B-219ENST00000479941 RPL30P62888 115 aaKnown RBP8.57□□□□□ -1.04
ATG4B-219ENST00000479941 CATR1Q13166 79 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms