RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 SPATA2Q9UM82 520 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 RBM7Q9Y580 266 aaKnown RBP16.63■□□□□ 0.25
HNF4A-205ENST00000443598 TGP01266 2768 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 TRAV41A0A0B4J266 112 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 IGKV1-16P04430 117 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 PSG5Q15238 335 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 MYOZ3Q8TDC0 251 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 NUDCD2Q8WVJ2 157 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 FLYWCH2Q96CP2 140 aaKnown RBP16.63■□□□□ 0.25
HNF4A-205ENST00000443598 SLC35D1Q9NTN3 355 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 NECAP2Q9NVZ3 263 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 WSB1Q9Y6I7 421 aa16.63■□□□□ 0.25
HNF4A-205ENST00000443598 IGLV1-40P01703 118 aa16.62■□□□□ 0.25
HNF4A-205ENST00000443598 LINC00205P59089 165 aa16.62■□□□□ 0.25
HNF4A-205ENST00000443598 RPS16P62249 146 aaKnown RBP16.62■□□□□ 0.25
HNF4A-205ENST00000443598 CX3CL1P78423 397 aa16.62■□□□□ 0.25
HNF4A-205ENST00000443598 CNIH2Q6PI25 160 aa16.62■□□□□ 0.25
HNF4A-205ENST00000443598 MINDY2Q8NBR6 621 aa16.62■□□□□ 0.25
HNF4A-205ENST00000443598 GPR61Q9BZJ8 451 aa16.62■□□□□ 0.25
HNF4A-205ENST00000443598 METTL1Q9UBP6 276 aaKnown RBP16.62■□□□□ 0.25
HNF4A-205ENST00000443598 DNAH3Q8TD57 4116 aa16.61■□□□□ 0.25
HNF4A-205ENST00000443598 G3V318 75 aa16.61■□□□□ 0.25
HNF4A-205ENST00000443598 LGALS7P47929 136 aa16.61■□□□□ 0.25
HNF4A-205ENST00000443598 ZNF562Q6V9R5 426 aa16.61■□□□□ 0.25
HNF4A-205ENST00000443598 LCNL1Q6ZST4 164 aa16.61■□□□□ 0.25
HNF4A-205ENST00000443598 TCTEX1D1Q8N7M0 179 aa16.61■□□□□ 0.25
HNF4A-205ENST00000443598 ADTRPQ96IZ2 230 aa16.61■□□□□ 0.25
HNF4A-205ENST00000443598 DIABLOQ9NR28 239 aa16.61■□□□□ 0.25
HNF4A-205ENST00000443598 CCL24O00175 119 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 SSX5O60225 188 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 RRASP10301 218 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 NDPQ00604 133 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 C19orf54Q5BKX5 351 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 FOXB2Q5VYV0 432 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 TMEM65Q6PI78 240 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 C4orf3Q8WVX3 66 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 C5orf30Q96GV9 206 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 RAX2Q96IS3 184 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 MCRIP2Q9BUT9 160 aaKnown RBP16.6■□□□□ 0.25
HNF4A-205ENST00000443598 ANXA10Q9UJ72 324 aa16.6■□□□□ 0.25
HNF4A-205ENST00000443598 TRAV18A0A075B6X5 111 aa16.59■□□□□ 0.25
HNF4A-205ENST00000443598 FCN1O00602 326 aa16.59■□□□□ 0.25
HNF4A-205ENST00000443598 TMEM267Q0VDI3 215 aaPredicted RBP16.59■□□□□ 0.25
HNF4A-205ENST00000443598 CBX3Q13185 183 aa16.59■□□□□ 0.25
HNF4A-205ENST00000443598 UBE2E2Q96LR5 201 aa16.59■□□□□ 0.25
HNF4A-205ENST00000443598 OR2W1Q9Y3N9 320 aa16.59■□□□□ 0.25
HNF4A-205ENST00000443598 NUBP2Q9Y5Y2 271 aa16.59■□□□□ 0.25
HNF4A-205ENST00000443598 SLC22A5O76082 557 aa16.59■□□□□ 0.25
HNF4A-205ENST00000443598 RPS19P39019 145 aaKnown RBP16.59■□□□□ 0.25
HNF4A-205ENST00000443598 RTL8BQ17RB0 113 aa16.59■□□□□ 0.25
HNF4A-205ENST00000443598 FBXO7Q9Y3I1 522 aa16.59■□□□□ 0.25
HNF4A-205ENST00000443598 HLA-DQB1P01920 261 aa16.58■□□□□ 0.24
HNF4A-205ENST00000443598 DUTP33316 252 aaKnown RBP16.58■□□□□ 0.24
HNF4A-205ENST00000443598 TGFBR1P36897 503 aa16.58■□□□□ 0.24
HNF4A-205ENST00000443598 LUMP51884 338 aaPredicted RBP16.58■□□□□ 0.24
HNF4A-205ENST00000443598 KIAA0141Q14154 515 aaPredicted RBP16.58■□□□□ 0.24
HNF4A-205ENST00000443598 AKIRIN2Q53H80 203 aa16.58■□□□□ 0.24
HNF4A-205ENST00000443598 TMEM177Q53S58 311 aa16.58■□□□□ 0.24
HNF4A-205ENST00000443598 DDB2Q92466 427 aa16.58■□□□□ 0.24
HNF4A-205ENST00000443598 KLK15Q9H2R5 256 aa16.58■□□□□ 0.24
HNF4A-205ENST00000443598 SLC25A17O43808 307 aa16.57■□□□□ 0.24
HNF4A-205ENST00000443598 IGLV2-23P01705 113 aa16.57■□□□□ 0.24
HNF4A-205ENST00000443598 EGR2P11161 476 aaPredicted RBP16.57■□□□□ 0.24
HNF4A-205ENST00000443598 RAB9AP51151 201 aa16.57■□□□□ 0.24
HNF4A-205ENST00000443598 ECSCRQ19T08 205 aa16.57■□□□□ 0.24
HNF4A-205ENST00000443598 ZNF645Q8N7E2 425 aa16.57■□□□□ 0.24
HNF4A-205ENST00000443598 ZNF491Q8N8L2 437 aa16.57■□□□□ 0.24
HNF4A-205ENST00000443598 AUNIPQ9H7T9 357 aa16.57■□□□□ 0.24
HNF4A-205ENST00000443598 FOXA2Q9Y261 457 aaPredicted RBP16.57■□□□□ 0.24
HNF4A-205ENST00000443598 VSIG4Q9Y279 399 aa16.57■□□□□ 0.24
HNF4A-205ENST00000443598 CA2P00918 260 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 NFYAP23511 347 aaPredicted RBP16.56■□□□□ 0.24
HNF4A-205ENST00000443598 LSM3P62310 102 aaKnown RBP16.56■□□□□ 0.24
HNF4A-205ENST00000443598 RUNX1Q01196 453 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 PYHIN1Q6K0P9 492 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 PPP1R27Q86WC6 154 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 BVESQ8NE79 360 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 S100A16Q96FQ6 103 aaKnown RBP16.56■□□□□ 0.24
HNF4A-205ENST00000443598 HARBI1Q96MB7 349 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 CLCC1Q96S66 551 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 A0A1W2PN81 502 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 XRCC3O43542 346 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 TUSC2O75896 110 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 PRB2P02812 416 aaPredicted RBP16.56■□□□□ 0.24
HNF4A-205ENST00000443598 CRYGBP07316 175 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 CHRNA7P36544 502 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 CBX5P45973 191 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 HOGA1Q86XE5 327 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 BEST4Q8NFU0 473 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 OR5M8Q8NGP6 311 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 ABHD5Q8WTS1 349 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 KCTD12Q96CX2 325 aaKnown RBP16.56■□□□□ 0.24
HNF4A-205ENST00000443598 DUX3Q96PT4 197 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 FUNDC2Q9BWH2 189 aa16.56■□□□□ 0.24
HNF4A-205ENST00000443598 AURKAIP1Q9NWT8 199 aaPredicted RBP16.56■□□□□ 0.24
HNF4A-205ENST00000443598 SHOXO15266 292 aa16.55■□□□□ 0.24
HNF4A-205ENST00000443598 EGFEM1PQ0D2K5 195 aa16.55■□□□□ 0.24
HNF4A-205ENST00000443598 FHL3Q13643 280 aa16.55■□□□□ 0.24
HNF4A-205ENST00000443598 DEFB136Q30KP8 78 aa16.55■□□□□ 0.24
HNF4A-205ENST00000443598 UBE2NLQ5JXB2 153 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms