RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 MRGPRGQ86SM5 289 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ZNF295-AS1Q8N0V1 137 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 SLC35E1Q96K37 410 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 AURKAIP1Q9NWT8 199 aaPredicted RBP13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CLEC18AA5D8T8 446 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 AQP7O14520 342 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 OR7C1O76099 320 aaPredicted RBP13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 HRASP01112 189 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 NPBWR2P48146 333 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MMDQ15546 238 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 RNF151Q2KHN1 245 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CYP2G1PQ6ZSU1 146 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CLEC18CQ8NCF0 446 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 OR1L6Q8NGR2 347 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 OR2T10Q8NGZ9 312 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 C10orf35Q96D05 121 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ABI3Q9P2A4 366 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MAP1LC3B2A6NCE7 125 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 OR6C6A6NF89 314 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 PDCD6O75340 191 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 GCH1P30793 250 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ARF1P84077 181 aaKnown RBP13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ZNF766Q5HY98 468 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 Q6ZSR3 168 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 PIGCQ92535 297 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 PRRG4Q9BZD6 226 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MAP1LC3BQ9GZQ8 125 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 PLK3Q9H4B4 646 aa13.5□□□□□ -0.25
MAP1LC3B-201ENST00000268607 HMGB3O15347 200 aaKnown RBP13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MDH2P40926 338 aaKnown RBP13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CLDN18P56856 261 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CCL28Q9NRJ3 127 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 RNF150Q9ULK6 438 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 YPEL1O60688 119 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 NDUFB8O95169 186 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 UCP1P25874 307 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 SELENOTP62341 195 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ARL16Q0P5N6 197 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CNN3Q15417 329 aaKnown RBP13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 TESK1Q15569 626 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 TPTE2P1Q5T6R2 138 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MDS2Q8NDY4 140 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 YPEL2Q96QA6 119 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 PLSCR2Q9NRY7 297 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 TMEM106BQ9NUM4 274 aa13.49□□□□□ -0.25
MAP1LC3B-201ENST00000268607 NRASP01111 189 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 SCTP09683 121 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 TMEM211Q6ICI0 200 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 Q6ZWC4 215 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 STPG4Q8N801 248 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CIB3Q96Q77 187 aaPredicted RBP13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ZNF503-AS2A6NEH8 195 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 NKX6-3A6NJ46 265 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 KBTBD11O94819 623 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 NXPH2O95156 264 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 IFNA1P01562 189 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 TEX43Q6ZNM6 134 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 VN1R17PQ8TDU5 208 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 OR51I2Q9H344 312 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 B4GALT7Q9UBV7 327 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 COL6A6A6NMZ7 2263 aa13.48□□□□□ -0.25
MAP1LC3B-201ENST00000268607 SLC22A20A6NK97 555 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 IAPPP10997 89 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CDKN1AP38936 164 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MEF2BQ02080 365 aaPredicted RBP13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 OR8B8Q15620 311 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 TMEM183BQ1AE95 376 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ASCL4Q6XD76 172 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 Q6ZVH6 145 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CISD2Q8N5K1 135 aaKnown RBP13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 OR5T1Q8NG75 326 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 LHX4Q969G2 390 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 AGMATQ9BSE5 352 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 VAMP8Q9BV40 100 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ARHGAP21Q5T5U3 1957 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 YLPM1P49750 1951 aaKnown RBP13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 GTF3C1Q12789 2109 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 RIPPLY2Q5TAB7 128 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 LHFPL2Q6ZUX7 228 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CENPVQ7Z7K6 275 aaPredicted RBP13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 LYG1Q8N1E2 194 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 GPR146Q96CH1 333 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CD46P15529 392 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 RBM11P57052 281 aaKnown RBP13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 DAZAP2Q15038 168 aaPredicted RBP13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 PARLQ9H300 379 aa13.47□□□□□ -0.25
MAP1LC3B-201ENST00000268607 PLCXD3Q63HM9 321 aa13.46□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ZNF525Q8N782 197 aa13.46□□□□□ -0.25
MAP1LC3B-201ENST00000268607 GATAD1Q8WUU5 269 aa13.46□□□□□ -0.25
MAP1LC3B-201ENST00000268607 C12orf49Q9H741 205 aa13.46□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MANBALQ9NQG1 85 aa13.46□□□□□ -0.25
MAP1LC3B-201ENST00000268607 SLC39A9Q9NUM3 307 aa13.46□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CRIM1Q9NZV1 1036 aa13.46□□□□□ -0.25
MAP1LC3B-201ENST00000268607 TRAPPC1Q9Y5R8 145 aa13.46□□□□□ -0.25
MAP1LC3B-201ENST00000268607 DUXBA0A1W2PPF3 345 aa13.46□□□□□ -0.26
MAP1LC3B-201ENST00000268607 GRIFINA4D1Z8 144 aa13.46□□□□□ -0.26
MAP1LC3B-201ENST00000268607 C5orf49A4QMS7 147 aa13.46□□□□□ -0.26
MAP1LC3B-201ENST00000268607 SYNGR4O95473 234 aa13.46□□□□□ -0.26
MAP1LC3B-201ENST00000268607 KLF3P57682 345 aaPredicted RBP13.46□□□□□ -0.26
MAP1LC3B-201ENST00000268607 PCBD1P61457 104 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms